0.012831
0.000000
0.000000
-0.000000
0.012831
0.000000
0.000000
-0.000000
0.011716
0.00000
0.00000
0.00000
Ogg, D.J.
Hargreaves, D.
Gerhardt, S.
Flavell, L.
McAlister, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
77.938
77.938
85.350
C21 H18 Cl2 N6 O4
489.311
(2S)-2-{[1-(2-chlorophenyl)-1H-pyrazolo[3,4-d]pyrimidin-4-yl]oxy}-N-(5-chloropyridin-2-yl)-3-(2-hydroxyethoxy)propanamide
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C6 H12 O6
180.156
alpha-D-glucopyranose
alpha-D-glucose; D-glucose; glucose
D-saccharide, alpha linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Y
1
N
C
Y
2
N
C
Y
3
N
C
Y
4
N
C
Y
5
N
C
Y
6
N
C
Y
7
N
N
Y
8
N
C
Y
9
N
C
Y
10
N
C
Y
11
N
N
Y
12
N
C
Y
13
N
N
Y
14
N
C
Y
15
N
N
N
16
N
O
N
17
S
C
N
18
N
C
N
19
N
O
N
20
N
C
N
21
N
C
N
22
N
O
N
23
N
C
N
24
N
O
N
25
N
N
Y
26
N
C
Y
27
N
C
Y
28
N
C
Y
29
N
C
Y
30
N
C
Y
31
N
N
N
32
N
CL
N
33
N
CL
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
N
N
53
S
C
N
54
N
C
N
55
N
O
N
56
N
C
N
57
N
O
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
N
N
66
S
C
N
67
N
C
N
68
N
O
N
69
N
C
N
70
N
C
N
71
N
C
N
72
N
N
N
73
N
C
N
74
N
N
N
75
N
N
N
76
N
O
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
N
N
93
S
C
N
94
N
C
N
95
N
O
N
96
N
C
N
97
N
C
N
98
N
O
N
99
N
N
N
100
N
O
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
S
C
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
N
N
126
R
C
N
127
N
C
N
128
N
O
N
129
N
C
N
130
N
S
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
S
C
N
140
R
C
N
141
S
C
N
142
S
C
N
143
R
C
N
144
N
C
N
145
N
O
N
146
N
O
N
147
N
O
N
148
N
O
N
149
N
O
N
150
N
O
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
N
N
164
S
C
N
165
N
C
N
166
N
O
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
N
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
O
N
191
N
O
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
N
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
O
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
N
N
213
S
C
N
214
N
C
N
215
N
O
N
216
N
C
Y
217
N
C
Y
218
N
N
Y
219
N
C
Y
220
N
C
Y
221
N
N
N
222
N
O
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
S
C
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
N
N
259
S
C
N
260
N
C
N
261
N
O
N
262
N
C
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
N
285
N
C
N
286
N
C
N
287
N
C
N
288
N
N
N
289
N
O
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
N
310
N
C
N
311
N
S
N
312
N
C
N
313
N
O
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
NA
N
326
N
N
N
327
S
C
N
328
N
C
N
329
N
O
N
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
Y
336
N
C
N
337
N
O
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
N
C
N
354
N
C
N
355
N
C
N
356
N
O
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
N
N
367
S
C
N
368
N
C
N
369
N
O
N
370
N
C
N
371
N
O
N
372
N
O
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
N
N
381
S
C
N
382
N
C
N
383
N
O
N
384
R
C
N
385
N
O
N
386
N
C
N
387
N
O
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
N
N
398
S
C
N
399
N
C
N
400
N
O
N
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
N
Y
406
N
C
Y
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
N
411
N
O
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
N
N
425
S
C
N
426
N
C
N
427
N
O
N
428
N
C
Y
429
N
C
Y
430
N
C
Y
431
N
C
Y
432
N
C
Y
433
N
C
Y
434
N
C
N
435
N
O
N
436
N
O
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
N
N
449
S
C
N
450
N
C
N
451
N
O
N
452
N
C
N
453
N
C
N
454
N
C
N
455
N
O
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
Y
1
N
doub
Y
2
N
sing
Y
3
N
sing
Y
4
N
doub
Y
5
N
doub
Y
6
N
sing
Y
7
N
sing
N
8
N
sing
Y
9
N
doub
Y
10
N
doub
Y
11
N
sing
Y
12
N
doub
Y
13
N
sing
N
14
N
sing
Y
15
N
sing
N
16
N
sing
Y
17
N
sing
N
18
N
sing
Y
19
N
sing
N
20
N
sing
Y
21
N
doub
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
doub
Y
30
N
doub
Y
31
N
sing
Y
32
N
sing
Y
33
N
doub
Y
34
N
doub
Y
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
doub
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
doub
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
doub
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
doub
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
doub
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
doub
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
doub
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
Y
218
N
sing
Y
219
N
doub
Y
220
N
doub
N
221
N
sing
Y
222
N
sing
N
223
N
sing
Y
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
doub
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
doub
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
Y
326
N
doub
Y
327
N
sing
Y
328
N
sing
N
329
N
sing
Y
330
N
doub
N
331
N
sing
Y
332
N
doub
N
333
N
sing
Y
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
doub
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
doub
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
doub
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
Y
395
N
doub
Y
396
N
sing
Y
397
N
sing
N
398
N
sing
Y
399
N
doub
Y
400
N
sing
Y
401
N
sing
N
402
N
sing
Y
403
N
sing
Y
404
N
doub
N
405
N
sing
Y
406
N
doub
N
407
N
sing
Y
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
doub
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
Y
423
N
doub
Y
424
N
sing
Y
425
N
sing
N
426
N
sing
Y
427
N
doub
N
428
N
sing
Y
429
N
doub
N
430
N
sing
Y
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
doub
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
To be Published
0353
Optimising pharmacokinetics of glucokinase activators with matched triplicate design sets the discovery of AZD3651 and AZD9485
10.2210/pdb4iwv/pdb
pdb_00004iwv
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
200.0
1
Osmic VariMax HF mirrors
CCD
2008-09-09
RIGAKU SATURN 944
Graded, multilayer confocal mirrors
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU FR-E DW
50807.680
Glucokinase isoform 3
2.7.1.2
GLUCOKINASE
E27A E28A E51A E52A
1
man
polymer
22.990
SODIUM ION
1
syn
non-polymer
180.156
alpha-D-glucopyranose
1
man
non-polymer
489.311
(2S)-2-{[1-(2-chlorophenyl)-1H-pyrazolo[3,4-d]pyrimidin-4-yl]oxy}-N-(5-chloropyridin-2-yl)-3-(2-hydroxyethoxy)propanamide
1
syn
non-polymer
18.015
water
151
nat
water
Hexokinase type IV, HK IV, Hexokinase-4, HK4, Hexokinase-D
no
no
GSSNSQVEQILAEFQLQAADLKKVMRRMQKEMDRGLRLETHAAASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV
KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTK
GFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDEG
RMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGA
FETRFVSQVESDTGDRKQIYNILSTLGLRPSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVD
GSVYKLHPSFKERFHASVRRLTPSCEITFIESEEGSGRGAALVSAVACKKACMLGQ
GSSNSQVEQILAEFQLQAADLKKVMRRMQKEMDRGLRLETHAAASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV
KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTK
GFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDEG
RMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGA
FETRFVSQVESDTGDRKQIYNILSTLGLRPSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVD
GSVYKLHPSFKERFHASVRRLTPSCEITFIESEEGSGRGAALVSAVACKKACMLGQ
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
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n
n
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n
n
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n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
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n
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n
n
n
n
n
n
n
n
n
n
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n
n
n
n
n
n
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n
n
n
n
n
n
n
n
n
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n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
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n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
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n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
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n
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n
n
n
n
human
sample
GCK
9606
Homo sapiens
562
Escherichia coli
1
2.55
51.78
VAPOR DIFFUSION, SITTING DROP
7.4
20% glucose, 10-18% Peg8000, 200mM sodium acetate, MMT 100mM pH7.0-8.5, pH 7.4, VAPOR DIFFUSION, SITTING DROP, temperature 292K
7.0-8.5
292
chem_comp
entity
pdbx_chem_comp_identifier
pdbx_entity_nonpoly
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Data collection
Database references
Derived calculations
Structure summary
Data collection
Database references
Refinement description
Structure summary
1
0
2013-04-24
1
1
2020-07-29
1
2
2023-09-20
_chem_comp.name
_chem_comp.type
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_ref_seq_dif.details
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
DGlcpa
a-D-glucopyranose
a-D-Glcp
Glc
RCSB
Y
RCSB
2013-01-24
REL
REL
NA
SODIUM ION
GLC
alpha-D-glucopyranose
1J9
(2S)-2-{[1-(2-chlorophenyl)-1H-pyrazolo[3,4-d]pyrimidin-4-yl]oxy}-N-(5-chloropyridin-2-yl)-3-(2-hydroxyethoxy)propanamide
HOH
water
1V4S
PDB ENTRY 1V4S
PDB
experimental model
NA
1
2
NA
NA
501
A
GLC
1
3
GLC
GLC
502
A
INH
1
4
1J9
1J9
503
A
HOH
1
5
HOH
HOH
601
A
HOH
2
5
HOH
HOH
602
A
HOH
3
5
HOH
HOH
603
A
HOH
5
5
HOH
HOH
604
A
HOH
6
5
HOH
HOH
605
A
HOH
7
5
HOH
HOH
606
A
HOH
8
5
HOH
HOH
607
A
HOH
9
5
HOH
HOH
608
A
HOH
10
5
HOH
HOH
609
A
HOH
11
5
HOH
HOH
610
A
HOH
12
5
HOH
HOH
611
A
HOH
13
5
HOH
HOH
612
A
HOH
14
5
HOH
HOH
613
A
HOH
15
5
HOH
HOH
614
A
HOH
16
5
HOH
HOH
615
A
HOH
17
5
HOH
HOH
616
A
HOH
18
5
HOH
HOH
617
A
HOH
19
5
HOH
HOH
618
A
HOH
20
5
HOH
HOH
619
A
HOH
21
5
HOH
HOH
620
A
HOH
22
5
HOH
HOH
621
A
HOH
23
5
HOH
HOH
622
A
HOH
24
5
HOH
HOH
623
A
HOH
25
5
HOH
HOH
624
A
HOH
26
5
HOH
HOH
625
A
HOH
27
5
HOH
HOH
626
A
HOH
28
5
HOH
HOH
627
A
HOH
29
5
HOH
HOH
628
A
HOH
30
5
HOH
HOH
629
A
HOH
31
5
HOH
HOH
630
A
HOH
32
5
HOH
HOH
631
A
HOH
33
5
HOH
HOH
632
A
HOH
34
5
HOH
HOH
633
A
HOH
35
5
HOH
HOH
634
A
HOH
36
5
HOH
HOH
635
A
HOH
37
5
HOH
HOH
636
A
HOH
38
5
HOH
HOH
637
A
HOH
39
5
HOH
HOH
638
A
HOH
41
5
HOH
HOH
639
A
HOH
42
5
HOH
HOH
640
A
HOH
43
5
HOH
HOH
641
A
HOH
44
5
HOH
HOH
642
A
HOH
45
5
HOH
HOH
643
A
HOH
46
5
HOH
HOH
644
A
HOH
47
5
HOH
HOH
645
A
HOH
48
5
HOH
HOH
646
A
HOH
49
5
HOH
HOH
647
A
HOH
50
5
HOH
HOH
648
A
HOH
51
5
HOH
HOH
649
A
HOH
52
5
HOH
HOH
650
A
HOH
53
5
HOH
HOH
651
A
HOH
54
5
HOH
HOH
652
A
HOH
55
5
HOH
HOH
653
A
HOH
56
5
HOH
HOH
654
A
HOH
57
5
HOH
HOH
655
A
HOH
58
5
HOH
HOH
656
A
HOH
59
5
HOH
HOH
657
A
HOH
60
5
HOH
HOH
658
A
HOH
62
5
HOH
HOH
659
A
HOH
63
5
HOH
HOH
660
A
HOH
64
5
HOH
HOH
661
A
HOH
65
5
HOH
HOH
662
A
HOH
66
5
HOH
HOH
663
A
HOH
67
5
HOH
HOH
664
A
HOH
68
5
HOH
HOH
665
A
HOH
69
5
HOH
HOH
666
A
HOH
70
5
HOH
HOH
667
A
HOH
71
5
HOH
HOH
668
A
HOH
72
5
HOH
HOH
669
A
HOH
73
5
HOH
HOH
670
A
HOH
74
5
HOH
HOH
671
A
HOH
75
5
HOH
HOH
672
A
HOH
76
5
HOH
HOH
673
A
HOH
77
5
HOH
HOH
674
A
HOH
78
5
HOH
HOH
675
A
HOH
79
5
HOH
HOH
676
A
HOH
80
5
HOH
HOH
677
A
HOH
81
5
HOH
HOH
678
A
HOH
82
5
HOH
HOH
679
A
HOH
83
5
HOH
HOH
680
A
HOH
84
5
HOH
HOH
681
A
HOH
85
5
HOH
HOH
682
A
HOH
86
5
HOH
HOH
683
A
HOH
87
5
HOH
HOH
684
A
HOH
88
5
HOH
HOH
685
A
HOH
89
5
HOH
HOH
686
A
HOH
90
5
HOH
HOH
687
A
HOH
91
5
HOH
HOH
688
A
HOH
92
5
HOH
HOH
689
A
HOH
93
5
HOH
HOH
690
A
HOH
94
5
HOH
HOH
691
A
HOH
95
5
HOH
HOH
692
A
HOH
96
5
HOH
HOH
693
A
HOH
97
5
HOH
HOH
694
A
HOH
98
5
HOH
HOH
695
A
HOH
99
5
HOH
HOH
696
A
HOH
100
5
HOH
HOH
697
A
HOH
102
5
HOH
HOH
698
A
HOH
104
5
HOH
HOH
699
A
HOH
105
5
HOH
HOH
700
A
HOH
106
5
HOH
HOH
701
A
HOH
107
5
HOH
HOH
702
A
HOH
108
5
HOH
HOH
703
A
HOH
109
5
HOH
HOH
704
A
HOH
110
5
HOH
HOH
705
A
HOH
111
5
HOH
HOH
706
A
HOH
114
5
HOH
HOH
707
A
HOH
115
5
HOH
HOH
708
A
HOH
116
5
HOH
HOH
709
A
HOH
117
5
HOH
HOH
710
A
HOH
118
5
HOH
HOH
711
A
HOH
119
5
HOH
HOH
712
A
HOH
121
5
HOH
HOH
713
A
HOH
124
5
HOH
HOH
714
A
HOH
125
5
HOH
HOH
715
A
HOH
126
5
HOH
HOH
716
A
HOH
127
5
HOH
HOH
717
A
HOH
128
5
HOH
HOH
718
A
HOH
129
5
HOH
HOH
719
A
HOH
130
5
HOH
HOH
720
A
HOH
131
5
HOH
HOH
721
A
HOH
132
5
HOH
HOH
722
A
HOH
134
5
HOH
HOH
723
A
HOH
135
5
HOH
HOH
724
A
HOH
136
5
HOH
HOH
725
A
HOH
137
5
HOH
HOH
726
A
HOH
140
5
HOH
HOH
727
A
HOH
141
5
HOH
HOH
728
A
HOH
142
5
HOH
HOH
729
A
HOH
143
5
HOH
HOH
730
A
HOH
144
5
HOH
HOH
731
A
HOH
145
5
HOH
HOH
732
A
HOH
146
5
HOH
HOH
733
A
HOH
147
5
HOH
HOH
734
A
HOH
148
5
HOH
HOH
735
A
HOH
150
5
HOH
HOH
736
A
HOH
151
5
HOH
HOH
737
A
HOH
152
5
HOH
HOH
738
A
HOH
153
5
HOH
HOH
739
A
HOH
154
5
HOH
HOH
740
A
HOH
155
5
HOH
HOH
741
A
HOH
156
5
HOH
HOH
742
A
HOH
158
5
HOH
HOH
743
A
HOH
160
5
HOH
HOH
744
A
HOH
161
5
HOH
HOH
745
A
HOH
162
5
HOH
HOH
746
A
HOH
163
5
HOH
HOH
747
A
HOH
164
5
HOH
HOH
748
A
HOH
165
5
HOH
HOH
749
A
HOH
167
5
HOH
HOH
750
A
HOH
168
5
HOH
HOH
751
A
n
1
10
A
SER
11
n
2
SER
11
A
SER
12
n
3
SER
12
A
ASN
13
n
4
ASN
13
A
SER
14
n
5
SER
14
A
GLN
15
n
6
GLN
15
A
VAL
16
n
7
VAL
16
A
GLU
17
n
8
GLU
17
A
GLN
18
n
9
GLN
18
A
ILE
19
n
10
ILE
19
A
LEU
20
n
11
LEU
20
A
ALA
21
n
12
ALA
21
A
GLU
22
n
13
GLU
22
A
PHE
23
n
14
PHE
23
A
GLN
24
n
15
GLN
24
A
LEU
25
n
16
LEU
25
A
GLN
26
n
17
GLN
26
A
ALA
27
n
18
ALA
27
A
ALA
28
n
19
ALA
28
A
ASP
29
n
20
ASP
29
A
LEU
30
n
21
LEU
30
A
LYS
31
n
22
LYS
31
A
LYS
32
n
23
LYS
32
A
VAL
33
n
24
VAL
33
A
MET
34
n
25
MET
34
A
ARG
35
n
26
ARG
35
A
ARG
36
n
27
ARG
36
A
MET
37
n
28
MET
37
A
GLN
38
n
29
GLN
38
A
LYS
39
n
30
LYS
39
A
GLU
40
n
31
GLU
40
A
MET
41
n
32
MET
41
A
ASP
42
n
33
ASP
42
A
ARG
43
n
34
ARG
43
A
GLY
44
n
35
GLY
44
A
LEU
45
n
36
LEU
45
A
ARG
46
n
37
ARG
46
A
LEU
47
n
38
LEU
47
A
GLU
48
n
39
GLU
48
A
THR
49
n
40
THR
49
A
HIS
50
n
41
HIS
50
A
ALA
51
n
42
ALA
51
A
ALA
52
n
43
ALA
52
A
ALA
53
n
44
ALA
53
A
SER
54
n
45
SER
54
A
VAL
55
n
46
VAL
55
A
LYS
56
n
47
LYS
56
A
MET
57
n
48
MET
57
A
LEU
58
n
49
LEU
58
A
PRO
59
n
50
PRO
59
A
THR
60
n
51
THR
60
A
TYR
61
n
52
TYR
61
A
VAL
62
n
53
VAL
62
A
ARG
63
n
54
ARG
63
A
SER
64
n
55
SER
64
A
THR
65
n
56
THR
65
A
PRO
66
n
57
PRO
66
A
GLU
67
n
58
GLU
67
A
GLY
68
n
59
GLY
68
A
SER
69
n
60
SER
69
A
GLU
70
n
61
GLU
70
A
VAL
71
n
62
VAL
71
A
GLY
72
n
63
GLY
72
A
ASP
73
n
64
ASP
73
A
PHE
74
n
65
PHE
74
A
LEU
75
n
66
LEU
75
A
SER
76
n
67
SER
76
A
LEU
77
n
68
LEU
77
A
ASP
78
n
69
ASP
78
A
LEU
79
n
70
LEU
79
A
GLY
80
n
71
GLY
80
A
GLY
81
n
72
GLY
81
A
THR
82
n
73
THR
82
A
ASN
83
n
74
ASN
83
A
PHE
84
n
75
PHE
84
A
ARG
85
n
76
ARG
85
A
VAL
86
n
77
VAL
86
A
MET
87
n
78
MET
87
A
LEU
88
n
79
LEU
88
A
VAL
89
n
80
VAL
89
A
LYS
90
n
81
LYS
90
A
VAL
91
n
82
VAL
91
A
GLY
92
n
83
GLY
92
A
GLU
93
n
84
GLU
93
A
n
85
94
A
n
86
95
A
n
87
96
A
n
88
97
A
GLN
98
n
89
GLN
98
A
TRP
99
n
90
TRP
99
A
SER
100
n
91
SER
100
A
VAL
101
n
92
VAL
101
A
LYS
102
n
93
LYS
102
A
THR
103
n
94
THR
103
A
LYS
104
n
95
LYS
104
A
HIS
105
n
96
HIS
105
A
GLN
106
n
97
GLN
106
A
MET
107
n
98
MET
107
A
TYR
108
n
99
TYR
108
A
SER
109
n
100
SER
109
A
ILE
110
n
101
ILE
110
A
PRO
111
n
102
PRO
111
A
GLU
112
n
103
GLU
112
A
ASP
113
n
104
ASP
113
A
ALA
114
n
105
ALA
114
A
MET
115
n
106
MET
115
A
THR
116
n
107
THR
116
A
GLY
117
n
108
GLY
117
A
THR
118
n
109
THR
118
A
ALA
119
n
110
ALA
119
A
GLU
120
n
111
GLU
120
A
MET
121
n
112
MET
121
A
LEU
122
n
113
LEU
122
A
PHE
123
n
114
PHE
123
A
ASP
124
n
115
ASP
124
A
TYR
125
n
116
TYR
125
A
ILE
126
n
117
ILE
126
A
SER
127
n
118
SER
127
A
GLU
128
n
119
GLU
128
A
CYS
129
n
120
CYS
129
A
ILE
130
n
121
ILE
130
A
SER
131
n
122
SER
131
A
ASP
132
n
123
ASP
132
A
PHE
133
n
124
PHE
133
A
LEU
134
n
125
LEU
134
A
ASP
135
n
126
ASP
135
A
LYS
136
n
127
LYS
136
A
HIS
137
n
128
HIS
137
A
GLN
138
n
129
GLN
138
A
MET
139
n
130
MET
139
A
LYS
140
n
131
LYS
140
A
HIS
141
n
132
HIS
141
A
LYS
142
n
133
LYS
142
A
LYS
143
n
134
LYS
143
A
LEU
144
n
135
LEU
144
A
PRO
145
n
136
PRO
145
A
LEU
146
n
137
LEU
146
A
GLY
147
n
138
GLY
147
A
PHE
148
n
139
PHE
148
A
THR
149
n
140
THR
149
A
PHE
150
n
141
PHE
150
A
SER
151
n
142
SER
151
A
PHE
152
n
143
PHE
152
A
PRO
153
n
144
PRO
153
A
VAL
154
n
145
VAL
154
A
ARG
155
n
146
ARG
155
A
HIS
156
n
147
HIS
156
A
GLU
157
n
148
GLU
157
A
ASP
158
n
149
ASP
158
A
ILE
159
n
150
ILE
159
A
ASP
160
n
151
ASP
160
A
LYS
161
n
152
LYS
161
A
GLY
162
n
153
GLY
162
A
ILE
163
n
154
ILE
163
A
LEU
164
n
155
LEU
164
A
LEU
165
n
156
LEU
165
A
ASN
166
n
157
ASN
166
A
TRP
167
n
158
TRP
167
A
THR
168
n
159
THR
168
A
LYS
169
n
160
LYS
169
A
GLY
170
n
161
GLY
170
A
PHE
171
n
162
PHE
171
A
LYS
172
n
163
LYS
172
A
ALA
173
n
164
ALA
173
A
SER
174
n
165
SER
174
A
GLY
175
n
166
GLY
175
A
ALA
176
n
167
ALA
176
A
GLU
177
n
168
GLU
177
A
GLY
178
n
169
GLY
178
A
ASN
179
n
170
ASN
179
A
ASN
180
n
171
ASN
180
A
VAL
181
n
172
VAL
181
A
VAL
182
n
173
VAL
182
A
GLY
183
n
174
GLY
183
A
LEU
184
n
175
LEU
184
A
LEU
185
n
176
LEU
185
A
ARG
186
n
177
ARG
186
A
ASP
187
n
178
ASP
187
A
ALA
188
n
179
ALA
188
A
ILE
189
n
180
ILE
189
A
LYS
190
n
181
LYS
190
A
ARG
191
n
182
ARG
191
A
ARG
192
n
183
ARG
192
A
GLY
193
n
184
GLY
193
A
ASP
194
n
185
ASP
194
A
PHE
195
n
186
PHE
195
A
GLU
196
n
187
GLU
196
A
MET
197
n
188
MET
197
A
ASP
198
n
189
ASP
198
A
VAL
199
n
190
VAL
199
A
VAL
200
n
191
VAL
200
A
ALA
201
n
192
ALA
201
A
MET
202
n
193
MET
202
A
VAL
203
n
194
VAL
203
A
ASN
204
n
195
ASN
204
A
ASP
205
n
196
ASP
205
A
THR
206
n
197
THR
206
A
VAL
207
n
198
VAL
207
A
ALA
208
n
199
ALA
208
A
THR
209
n
200
THR
209
A
MET
210
n
201
MET
210
A
ILE
211
n
202
ILE
211
A
SER
212
n
203
SER
212
A
CYS
213
n
204
CYS
213
A
TYR
214
n
205
TYR
214
A
TYR
215
n
206
TYR
215
A
GLU
216
n
207
GLU
216
A
ASP
217
n
208
ASP
217
A
HIS
218
n
209
HIS
218
A
GLN
219
n
210
GLN
219
A
CYS
220
n
211
CYS
220
A
GLU
221
n
212
GLU
221
A
VAL
222
n
213
VAL
222
A
GLY
223
n
214
GLY
223
A
MET
224
n
215
MET
224
A
ILE
225
n
216
ILE
225
A
VAL
226
n
217
VAL
226
A
GLY
227
n
218
GLY
227
A
THR
228
n
219
THR
228
A
GLY
229
n
220
GLY
229
A
CYS
230
n
221
CYS
230
A
ASN
231
n
222
ASN
231
A
ALA
232
n
223
ALA
232
A
CYS
233
n
224
CYS
233
A
TYR
234
n
225
TYR
234
A
MET
235
n
226
MET
235
A
GLU
236
n
227
GLU
236
A
GLU
237
n
228
GLU
237
A
MET
238
n
229
MET
238
A
GLN
239
n
230
GLN
239
A
ASN
240
n
231
ASN
240
A
VAL
241
n
232
VAL
241
A
GLU
242
n
233
GLU
242
A
LEU
243
n
234
LEU
243
A
VAL
244
n
235
VAL
244
A
GLU
245
n
236
GLU
245
A
GLY
246
n
237
GLY
246
A
ASP
247
n
238
ASP
247
A
GLU
248
n
239
GLU
248
A
GLY
249
n
240
GLY
249
A
ARG
250
n
241
ARG
250
A
MET
251
n
242
MET
251
A
CYS
252
n
243
CYS
252
A
VAL
253
n
244
VAL
253
A
ASN
254
n
245
ASN
254
A
THR
255
n
246
THR
255
A
GLU
256
n
247
GLU
256
A
TRP
257
n
248
TRP
257
A
GLY
258
n
249
GLY
258
A
ALA
259
n
250
ALA
259
A
PHE
260
n
251
PHE
260
A
GLY
261
n
252
GLY
261
A
ASP
262
n
253
ASP
262
A
SER
263
n
254
SER
263
A
GLY
264
n
255
GLY
264
A
GLU
265
n
256
GLU
265
A
LEU
266
n
257
LEU
266
A
ASP
267
n
258
ASP
267
A
GLU
268
n
259
GLU
268
A
PHE
269
n
260
PHE
269
A
LEU
270
n
261
LEU
270
A
LEU
271
n
262
LEU
271
A
GLU
272
n
263
GLU
272
A
TYR
273
n
264
TYR
273
A
ASP
274
n
265
ASP
274
A
ARG
275
n
266
ARG
275
A
LEU
276
n
267
LEU
276
A
VAL
277
n
268
VAL
277
A
ASP
278
n
269
ASP
278
A
GLU
279
n
270
GLU
279
A
SER
280
n
271
SER
280
A
SER
281
n
272
SER
281
A
ALA
282
n
273
ALA
282
A
ASN
283
n
274
ASN
283
A
PRO
284
n
275
PRO
284
A
GLY
285
n
276
GLY
285
A
GLN
286
n
277
GLN
286
A
GLN
287
n
278
GLN
287
A
LEU
288
n
279
LEU
288
A
TYR
289
n
280
TYR
289
A
GLU
290
n
281
GLU
290
A
LYS
291
n
282
LYS
291
A
LEU
292
n
283
LEU
292
A
ILE
293
n
284
ILE
293
A
GLY
294
n
285
GLY
294
A
GLY
295
n
286
GLY
295
A
LYS
296
n
287
LYS
296
A
TYR
297
n
288
TYR
297
A
MET
298
n
289
MET
298
A
GLY
299
n
290
GLY
299
A
GLU
300
n
291
GLU
300
A
LEU
301
n
292
LEU
301
A
VAL
302
n
293
VAL
302
A
ARG
303
n
294
ARG
303
A
LEU
304
n
295
LEU
304
A
VAL
305
n
296
VAL
305
A
LEU
306
n
297
LEU
306
A
LEU
307
n
298
LEU
307
A
ARG
308
n
299
ARG
308
A
LEU
309
n
300
LEU
309
A
VAL
310
n
301
VAL
310
A
ASP
311
n
302
ASP
311
A
GLU
312
n
303
GLU
312
A
ASN
313
n
304
ASN
313
A
LEU
314
n
305
LEU
314
A
LEU
315
n
306
LEU
315
A
PHE
316
n
307
PHE
316
A
HIS
317
n
308
HIS
317
A
GLY
318
n
309
GLY
318
A
GLU
319
n
310
GLU
319
A
ALA
320
n
311
ALA
320
A
SER
321
n
312
SER
321
A
GLU
322
n
313
GLU
322
A
GLN
323
n
314
GLN
323
A
LEU
324
n
315
LEU
324
A
ARG
325
n
316
ARG
325
A
THR
326
n
317
THR
326
A
ARG
327
n
318
ARG
327
A
GLY
328
n
319
GLY
328
A
ALA
329
n
320
ALA
329
A
PHE
330
n
321
PHE
330
A
GLU
331
n
322
GLU
331
A
THR
332
n
323
THR
332
A
ARG
333
n
324
ARG
333
A
PHE
334
n
325
PHE
334
A
VAL
335
n
326
VAL
335
A
SER
336
n
327
SER
336
A
GLN
337
n
328
GLN
337
A
VAL
338
n
329
VAL
338
A
GLU
339
n
330
GLU
339
A
SER
340
n
331
SER
340
A
n
332
341
A
n
333
342
A
GLY
343
n
334
GLY
343
A
ASP
344
n
335
ASP
344
A
ARG
345
n
336
ARG
345
A
LYS
346
n
337
LYS
346
A
GLN
347
n
338
GLN
347
A
ILE
348
n
339
ILE
348
A
TYR
349
n
340
TYR
349
A
ASN
350
n
341
ASN
350
A
ILE
351
n
342
ILE
351
A
LEU
352
n
343
LEU
352
A
SER
353
n
344
SER
353
A
THR
354
n
345
THR
354
A
LEU
355
n
346
LEU
355
A
GLY
356
n
347
GLY
356
A
LEU
357
n
348
LEU
357
A
ARG
358
n
349
ARG
358
A
PRO
359
n
350
PRO
359
A
SER
360
n
351
SER
360
A
THR
361
n
352
THR
361
A
THR
362
n
353
THR
362
A
ASP
363
n
354
ASP
363
A
CYS
364
n
355
CYS
364
A
ASP
365
n
356
ASP
365
A
ILE
366
n
357
ILE
366
A
VAL
367
n
358
VAL
367
A
ARG
368
n
359
ARG
368
A
ARG
369
n
360
ARG
369
A
ALA
370
n
361
ALA
370
A
CYS
371
n
362
CYS
371
A
GLU
372
n
363
GLU
372
A
SER
373
n
364
SER
373
A
VAL
374
n
365
VAL
374
A
SER
375
n
366
SER
375
A
THR
376
n
367
THR
376
A
ARG
377
n
368
ARG
377
A
ALA
378
n
369
ALA
378
A
ALA
379
n
370
ALA
379
A
HIS
380
n
371
HIS
380
A
MET
381
n
372
MET
381
A
CYS
382
n
373
CYS
382
A
SER
383
n
374
SER
383
A
ALA
384
n
375
ALA
384
A
GLY
385
n
376
GLY
385
A
LEU
386
n
377
LEU
386
A
ALA
387
n
378
ALA
387
A
GLY
388
n
379
GLY
388
A
VAL
389
n
380
VAL
389
A
ILE
390
n
381
ILE
390
A
ASN
391
n
382
ASN
391
A
ARG
392
n
383
ARG
392
A
MET
393
n
384
MET
393
A
ARG
394
n
385
ARG
394
A
GLU
395
n
386
GLU
395
A
SER
396
n
387
SER
396
A
ARG
397
n
388
ARG
397
A
SER
398
n
389
SER
398
A
GLU
399
n
390
GLU
399
A
ASP
400
n
391
ASP
400
A
VAL
401
n
392
VAL
401
A
MET
402
n
393
MET
402
A
ARG
403
n
394
ARG
403
A
ILE
404
n
395
ILE
404
A
THR
405
n
396
THR
405
A
VAL
406
n
397
VAL
406
A
GLY
407
n
398
GLY
407
A
VAL
408
n
399
VAL
408
A
ASP
409
n
400
ASP
409
A
GLY
410
n
401
GLY
410
A
SER
411
n
402
SER
411
A
VAL
412
n
403
VAL
412
A
TYR
413
n
404
TYR
413
A
LYS
414
n
405
LYS
414
A
LEU
415
n
406
LEU
415
A
HIS
416
n
407
HIS
416
A
PRO
417
n
408
PRO
417
A
SER
418
n
409
SER
418
A
PHE
419
n
410
PHE
419
A
LYS
420
n
411
LYS
420
A
GLU
421
n
412
GLU
421
A
ARG
422
n
413
ARG
422
A
PHE
423
n
414
PHE
423
A
HIS
424
n
415
HIS
424
A
ALA
425
n
416
ALA
425
A
SER
426
n
417
SER
426
A
VAL
427
n
418
VAL
427
A
ARG
428
n
419
ARG
428
A
ARG
429
n
420
ARG
429
A
LEU
430
n
421
LEU
430
A
THR
431
n
422
THR
431
A
PRO
432
n
423
PRO
432
A
SER
433
n
424
SER
433
A
CYS
434
n
425
CYS
434
A
GLU
435
n
426
GLU
435
A
ILE
436
n
427
ILE
436
A
THR
437
n
428
THR
437
A
PHE
438
n
429
PHE
438
A
ILE
439
n
430
ILE
439
A
GLU
440
n
431
GLU
440
A
SER
441
n
432
SER
441
A
GLU
442
n
433
GLU
442
A
GLU
443
n
434
GLU
443
A
GLY
444
n
435
GLY
444
A
SER
445
n
436
SER
445
A
GLY
446
n
437
GLY
446
A
ARG
447
n
438
ARG
447
A
GLY
448
n
439
GLY
448
A
ALA
449
n
440
ALA
449
A
ALA
450
n
441
ALA
450
A
LEU
451
n
442
LEU
451
A
VAL
452
n
443
VAL
452
A
SER
453
n
444
SER
453
A
ALA
454
n
445
ALA
454
A
VAL
455
n
446
VAL
455
A
ALA
456
n
447
ALA
456
A
CYS
457
n
448
CYS
457
A
LYS
458
n
449
LYS
458
A
LYS
459
n
450
LYS
459
A
n
451
460
A
n
452
461
A
n
453
462
A
n
454
463
A
n
455
464
A
n
456
465
A
0.9171
-0.5735
-0.0930
0.4236
0.1569
0.1685
-0.0293
-0.0831
0.1469
0.0322
0.0618
-0.1137
0.0307
0.0016
-0.0325
0.0361
-0.0070
0.0158
0.0252
-0.0221
0.0495
refined
64.8241
24.3921
-0.0188
X-RAY DIFFRACTION
A
11
A
459
X-RAY DIFFRACTION
1
author_and_software_defined_assembly
PISA
1
monomeric
A
MET
238
A
O
MET
229
1_555
A
NA
501
B
NA
NA
1_555
A
VAL
241
A
O
VAL
232
1_555
89.9
A
MET
238
A
O
MET
229
1_555
A
NA
501
B
NA
NA
1_555
A
VAL
244
A
O
VAL
235
1_555
149.4
A
VAL
241
A
O
VAL
232
1_555
A
NA
501
B
NA
NA
1_555
A
VAL
244
A
O
VAL
235
1_555
81.1
A
MET
238
A
O
MET
229
1_555
A
NA
501
B
NA
NA
1_555
A
GLY
246
A
O
GLY
237
1_555
82.0
A
VAL
241
A
O
VAL
232
1_555
A
NA
501
B
NA
NA
1_555
A
GLY
246
A
O
GLY
237
1_555
171.1
A
VAL
244
A
O
VAL
235
1_555
A
NA
501
B
NA
NA
1_555
A
GLY
246
A
O
GLY
237
1_555
104.0
A
MET
238
A
O
MET
229
1_555
A
NA
501
B
NA
NA
1_555
A
HOH
696
E
O
HOH
1_555
103.0
A
VAL
241
A
O
VAL
232
1_555
A
NA
501
B
NA
NA
1_555
A
HOH
696
E
O
HOH
1_555
99.2
A
VAL
244
A
O
VAL
235
1_555
A
NA
501
B
NA
NA
1_555
A
HOH
696
E
O
HOH
1_555
107.4
A
GLY
246
A
O
GLY
237
1_555
A
NA
501
B
NA
NA
1_555
A
HOH
696
E
O
HOH
1_555
86.2
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
62
A
N
VAL
53
A
O
CYS
252
A
O
CYS
243
A
O
MET
251
A
O
MET
242
A
N
GLU
236
A
N
GLU
227
A
O
CYS
233
A
O
CYS
224
A
N
GLY
223
A
N
GLY
214
A
N
MET
224
A
N
MET
215
A
O
GLY
407
A
O
GLY
398
A
N
VAL
406
A
N
VAL
397
A
O
ILE
439
A
O
ILE
430
A
O
TYR
108
A
O
TYR
99
A
N
PHE
84
A
N
PHE
75
A
O
VAL
89
A
O
VAL
80
A
N
PHE
74
A
N
PHE
65
A
N
LEU
77
A
N
LEU
68
A
O
THR
149
A
O
THR
140
A
N
PHE
150
A
N
PHE
141
A
O
VAL
203
A
O
VAL
194
A
N
GLU
157
A
N
GLU
148
A
O
LYS
161
A
O
LYS
152
1
A
GLY
10
A
GLY
1
1
Y
1
A
GLY
94
A
GLY
85
1
Y
1
A
GLU
95
A
GLU
86
1
Y
1
A
GLU
96
A
GLU
87
1
Y
1
A
GLY
97
A
GLY
88
1
Y
1
A
ASP
341
A
ASP
332
1
Y
1
A
THR
342
A
THR
333
1
Y
1
A
ALA
460
A
ALA
451
1
Y
1
A
CYS
461
A
CYS
452
1
Y
1
A
MET
462
A
MET
453
1
Y
1
A
LEU
463
A
LEU
454
1
Y
1
A
GLY
464
A
GLY
455
1
Y
1
A
GLN
465
A
GLN
456
1
Y
1
11.02
1.70
111.00
122.02
A
A
A
CB
CG
CD1
LEU
LEU
LEU
77
77
77
N
1
3.18
0.50
120.30
123.48
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
250
250
250
N
1
5.28
0.50
120.30
125.58
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
397
397
397
N
1
-3.09
0.50
120.30
117.21
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
397
397
397
N
1
A
A
CD
OE1
GLU
GLU
196
196
-0.066
0.011
1.252
1.186
N
1
A
MET
139
-140.54
22.63
1
A
SER
151
-91.40
57.91
1
A
ALA
173
-38.59
132.47
1
A
ILE
293
-123.26
-50.50
1
A
HIS
317
28.26
41.78
1
A
SER
321
-67.91
-176.00
1
A
SER
353
-25.05
-65.71
1
A
LEU
355
-66.11
4.95
1
A
SER
360
-55.64
173.45
1
A
ARG
397
-121.69
-163.97
1
A
GLU
443
-152.63
36.48
44.590
-1.08
0.00
-0.00
-1.08
-0.00
2.16
0.952
0.911
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.24982
0.19897
0.20165
0.20165
2.10
37.46
1450
29845
26853
5.1
94.83
11.438
0.155
RANDOM
1
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
0.239
0.201
0.80
0.80
1.20
PDB ENTRY 1V4S
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
2.10
37.46
151
3654
46
0
3457
0.016
0.019
3593
0.001
0.020
3355
1.854
1.986
4830
0.888
3.001
7716
6.787
5.000
440
38.703
23.855
166
16.662
15.000
647
21.455
15.000
30
0.110
0.200
529
0.007
0.020
4127
0.001
0.020
799
0.262
0.261
2.155
63
1503
20
71.41
27.84
2.1
55.0
4IWV
29845
28409
2.0
2.0
0.052
1
10.6
2.43
95.2
0.275
2.10
2.18
2.0
2825
1
2.1
73.4
data collection
CrystalClear
phasing
AMoRE
refinement
REFMAC
5.7.0032
data reduction
d*TREK
data scaling
d*TREK
Crystals structure of Human Glucokinase in complex with small molecule activator
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
A
SER
11
A
SER
2
HELX_P
A
ALA
21
A
ALA
12
1
1
11
A
GLU
22
A
GLU
13
HELX_P
A
GLN
24
A
GLN
15
5
2
3
A
GLN
26
A
GLN
17
HELX_P
A
ARG
46
A
ARG
37
1
3
21
A
ARG
46
A
ARG
37
HELX_P
A
ALA
51
A
ALA
42
1
4
6
A
PRO
111
A
PRO
102
HELX_P
A
THR
116
A
THR
107
1
5
6
A
THR
118
A
THR
109
HELX_P
A
HIS
137
A
HIS
128
1
6
20
A
ASN
180
A
ASN
171
HELX_P
A
GLY
193
A
GLY
184
1
7
14
A
ASN
204
A
ASN
195
HELX_P
A
ASP
217
A
ASP
208
1
8
14
A
GLN
239
A
GLN
230
HELX_P
A
VAL
241
A
VAL
232
5
9
3
A
GLU
256
A
GLU
247
HELX_P
A
PHE
260
A
PHE
251
5
10
5
A
LEU
266
A
LEU
257
HELX_P
A
LEU
270
A
LEU
261
5
11
5
A
LEU
271
A
LEU
262
HELX_P
A
SER
280
A
SER
271
1
12
10
A
GLN
287
A
GLN
278
HELX_P
A
GLY
294
A
GLY
285
1
13
8
A
GLY
294
A
GLY
285
HELX_P
A
ASP
311
A
ASP
302
1
14
18
A
LEU
315
A
LEU
306
HELX_P
A
GLU
319
A
GLU
310
5
15
5
A
GLU
331
A
GLU
322
HELX_P
A
GLU
339
A
GLU
330
1
16
9
A
ARG
345
A
ARG
336
HELX_P
A
SER
353
A
SER
344
1
17
9
A
SER
360
A
SER
351
HELX_P
A
SER
396
A
SER
387
1
18
37
A
GLY
410
A
GLY
401
HELX_P
A
HIS
416
A
HIS
407
1
19
7
A
SER
418
A
SER
409
HELX_P
A
THR
431
A
THR
422
1
20
14
A
GLU
443
A
GLU
434
HELX_P
A
LYS
459
A
LYS
450
1
21
17
disulf
2.021
A
CYS
213
A
SG
CYS
204
1_555
A
CYS
220
A
SG
CYS
211
1_555
metalc
2.333
A
MET
238
A
O
MET
229
1_555
A
NA
501
B
NA
NA
1_555
metalc
2.256
A
VAL
241
A
O
VAL
232
1_555
A
NA
501
B
NA
NA
1_555
metalc
2.213
A
VAL
244
A
O
VAL
235
1_555
A
NA
501
B
NA
NA
1_555
metalc
2.616
A
GLY
246
A
O
GLY
237
1_555
A
NA
501
B
NA
NA
1_555
metalc
2.539
A
NA
501
B
NA
NA
1_555
A
HOH
696
E
O
HOH
1_555
TRANSFERASE/TRANSFERASE INHIBITOR
Allosteric Site, Catalysis, Enzyme Activation, Gene Expression Regulation, Glucokinase, Glucose, Homeostasis, Humans, Hypoglycemia, Kinetics, Biological, Models, Molecular, Mutation, Protein Conformation, Scattering, Radiation, X-Rays, TRANSFERASE-TRANSFERASE INHIBITOR complex
HXK4_HUMAN
UNP
1
13
P35557
NSQVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVKVG
EGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTKGFK
ASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDEGRMC
VNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFET
RFVSQVESDTGDRKQIYNILSTLGLRPSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSV
YKLHPSFKERFHASVRRLTPSCEITFIESEEGSGRGAALVSAVACKKACMLGQ
13
465
4IWV
13
465
P35557
A
1
4
456
1
expression tag
GLY
10
4IWV
A
P35557
UNP
1
1
expression tag
SER
11
4IWV
A
P35557
UNP
2
1
expression tag
SER
12
4IWV
A
P35557
UNP
3
1
GLU
engineered mutation
ALA
27
4IWV
A
P35557
UNP
27
18
1
GLU
engineered mutation
ALA
28
4IWV
A
P35557
UNP
28
19
1
GLU
engineered mutation
ALA
51
4IWV
A
P35557
UNP
51
42
1
GLU
engineered mutation
ALA
52
4IWV
A
P35557
UNP
52
43
6
5
2
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
A
LEU
58
A
LEU
49
A
ARG
63
A
ARG
54
A
ARG
250
A
ARG
241
A
ASN
254
A
ASN
245
A
CYS
230
A
CYS
221
A
GLU
237
A
GLU
228
A
CYS
220
A
CYS
211
A
VAL
226
A
VAL
217
A
MET
402
A
MET
393
A
ASP
409
A
ASP
400
A
CYS
434
A
CYS
425
A
GLU
440
A
GLU
431
A
SER
100
A
SER
91
A
SER
109
A
SER
100
A
ASN
83
A
ASN
74
A
GLY
92
A
GLY
83
A
GLY
72
A
GLY
63
A
LEU
79
A
LEU
70
A
LEU
144
A
LEU
135
A
PHE
150
A
PHE
141
A
MET
197
A
MET
188
A
VAL
203
A
VAL
194
A
VAL
154
A
VAL
145
A
ASP
158
A
ASP
149
A
LYS
161
A
LYS
152
A
LEU
164
A
LEU
155
76
P 41