1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Montserret, R.
Penin, F.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
US
Plos Pathog.
1553-7366
10
e1004501
e1004501
10.1371/journal.ppat.1004501
25392992
Aminoterminal Amphipathic alpha-Helix AH1 of Hepatitis C Virus Nonstructural Protein 4B Possesses a Dual Role in RNA Replication and Virus Production.
2014
10.2210/pdb2lvg/pdb
pdb_00002lvg
4385.052
Non-structural protein 4B
UNP residues 1716-1755
1
syn
polymer
NS4B, p27
no
no
ASRAALIEEGQRIAEMLKSKIQGLLQQASKQAQDIQPAMQ
ASRAALIEEGQRIAEMLKSKIQGLLQQASKQAQDIQPAMQ
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
membrane segment 1-40 of Hepatitis C virus NS4B protein.
database_2
pdbx_database_status
pdbx_nmr_software
pdbx_nmr_spectrometer
repository
Initial release
Database references
Database references
Data collection
Database references
Other
1
0
2013-06-19
1
1
2014-10-22
1
2
2014-11-26
1
3
2023-06-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_nmr_data
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
Identification of a novel determinant for membrane association in hepatitis C virus nonstructural protein 4B.
BMRB
Y
RCSB
2012-07-05
REL
REL
REL
REL
356411
HCV
Hepatitis C virus JFH-1
sample
200
structures with the least restraint violations
50
37
2D 1H-13C HSQC
2D 1H-1H NOESY
2D 1H-1H TOCSY
40
v/v
10
v/v
[U-100% 2H]
50
v/v
[U-100% 2H]
0.2
uM
5
ambient
298
K
torsion angle dynamics
1
closest to the average
40 v/v H2O, 10 v/v [U-100% 2H] D2O, 50 v/v [U-100% 2H] TFE, 0.2 uM DSS, trifluoroethanol/water
trifluoroethanol/water
Bruker Biospin
collection
TopSpin
Bruker Biospin
processing
TopSpin
Goddard
chemical shift assignment
Sparky
Schwieters, Kuszewski, Tjandra and Clore
structure solution
X-PLOR NIH
Cornilescu, Delaglio and Bax
geometry optimization
TALOS
Schwieters, Kuszewski, Tjandra and Clore
refinement
X-PLOR NIH
500
Bruker
AVANCE
Bruker Avance
ALA
1
n
1
ALA
1
A
SER
2
n
2
SER
2
A
ARG
3
n
3
ARG
3
A
ALA
4
n
4
ALA
4
A
ALA
5
n
5
ALA
5
A
LEU
6
n
6
LEU
6
A
ILE
7
n
7
ILE
7
A
GLU
8
n
8
GLU
8
A
GLU
9
n
9
GLU
9
A
GLY
10
n
10
GLY
10
A
GLN
11
n
11
GLN
11
A
ARG
12
n
12
ARG
12
A
ILE
13
n
13
ILE
13
A
ALA
14
n
14
ALA
14
A
GLU
15
n
15
GLU
15
A
MET
16
n
16
MET
16
A
LEU
17
n
17
LEU
17
A
LYS
18
n
18
LYS
18
A
SER
19
n
19
SER
19
A
LYS
20
n
20
LYS
20
A
ILE
21
n
21
ILE
21
A
GLN
22
n
22
GLN
22
A
GLY
23
n
23
GLY
23
A
LEU
24
n
24
LEU
24
A
LEU
25
n
25
LEU
25
A
GLN
26
n
26
GLN
26
A
GLN
27
n
27
GLN
27
A
ALA
28
n
28
ALA
28
A
SER
29
n
29
SER
29
A
LYS
30
n
30
LYS
30
A
GLN
31
n
31
GLN
31
A
ALA
32
n
32
ALA
32
A
GLN
33
n
33
GLN
33
A
ASP
34
n
34
ASP
34
A
ILE
35
n
35
ILE
35
A
GLN
36
n
36
GLN
36
A
PRO
37
n
37
PRO
37
A
ALA
38
n
38
ALA
38
A
MET
39
n
39
MET
39
A
GLN
40
n
40
GLN
40
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
ARG
3
0.317
SIDE CHAIN
1
A
ARG
12
0.302
SIDE CHAIN
2
A
ARG
3
0.312
SIDE CHAIN
2
A
ARG
12
0.316
SIDE CHAIN
3
A
ARG
3
0.317
SIDE CHAIN
3
A
ARG
12
0.317
SIDE CHAIN
4
A
ARG
3
0.291
SIDE CHAIN
4
A
ARG
12
0.274
SIDE CHAIN
5
A
ARG
3
0.291
SIDE CHAIN
5
A
ARG
12
0.312
SIDE CHAIN
6
A
ARG
3
0.317
SIDE CHAIN
6
A
ARG
12
0.301
SIDE CHAIN
7
A
ARG
3
0.317
SIDE CHAIN
7
A
ARG
12
0.308
SIDE CHAIN
8
A
ARG
3
0.318
SIDE CHAIN
8
A
ARG
12
0.258
SIDE CHAIN
9
A
ARG
3
0.307
SIDE CHAIN
9
A
ARG
12
0.316
SIDE CHAIN
10
A
ARG
3
0.318
SIDE CHAIN
10
A
ARG
12
0.316
SIDE CHAIN
11
A
ARG
3
0.318
SIDE CHAIN
11
A
ARG
12
0.317
SIDE CHAIN
12
A
ARG
3
0.310
SIDE CHAIN
12
A
ARG
12
0.281
SIDE CHAIN
13
A
ARG
3
0.318
SIDE CHAIN
13
A
ARG
12
0.316
SIDE CHAIN
14
A
ARG
3
0.312
SIDE CHAIN
14
A
ARG
12
0.292
SIDE CHAIN
15
A
ARG
3
0.312
SIDE CHAIN
15
A
ARG
12
0.317
SIDE CHAIN
16
A
ARG
3
0.310
SIDE CHAIN
16
A
ARG
12
0.312
SIDE CHAIN
17
A
ARG
3
0.300
SIDE CHAIN
17
A
ARG
12
0.314
SIDE CHAIN
18
A
ARG
3
0.317
SIDE CHAIN
18
A
ARG
12
0.317
SIDE CHAIN
19
A
ARG
3
0.317
SIDE CHAIN
19
A
ARG
12
0.300
SIDE CHAIN
20
A
ARG
3
0.289
SIDE CHAIN
20
A
ARG
12
0.308
SIDE CHAIN
21
A
ARG
3
0.315
SIDE CHAIN
21
A
ARG
12
0.316
SIDE CHAIN
22
A
ARG
3
0.290
SIDE CHAIN
22
A
ARG
12
0.315
SIDE CHAIN
23
A
ARG
3
0.277
SIDE CHAIN
23
A
ARG
12
0.284
SIDE CHAIN
24
A
ARG
3
0.317
SIDE CHAIN
24
A
ARG
12
0.309
SIDE CHAIN
25
A
ARG
3
0.310
SIDE CHAIN
25
A
ARG
12
0.284
SIDE CHAIN
26
A
ARG
3
0.316
SIDE CHAIN
26
A
ARG
12
0.317
SIDE CHAIN
27
A
ARG
3
0.301
SIDE CHAIN
27
A
ARG
12
0.305
SIDE CHAIN
28
A
ARG
3
0.317
SIDE CHAIN
28
A
ARG
12
0.297
SIDE CHAIN
29
A
ARG
3
0.317
SIDE CHAIN
29
A
ARG
12
0.315
SIDE CHAIN
30
A
ARG
3
0.316
SIDE CHAIN
30
A
ARG
12
0.317
SIDE CHAIN
31
A
ARG
3
0.313
SIDE CHAIN
31
A
ARG
12
0.317
SIDE CHAIN
32
A
ARG
3
0.312
SIDE CHAIN
32
A
ARG
12
0.317
SIDE CHAIN
33
A
ARG
3
0.316
SIDE CHAIN
33
A
ARG
12
0.303
SIDE CHAIN
34
A
ARG
3
0.318
SIDE CHAIN
34
A
ARG
12
0.316
SIDE CHAIN
35
A
ARG
3
0.293
SIDE CHAIN
35
A
ARG
12
0.309
SIDE CHAIN
36
A
ARG
3
0.310
SIDE CHAIN
36
A
ARG
12
0.314
SIDE CHAIN
37
A
ARG
3
0.317
SIDE CHAIN
37
A
ARG
12
0.316
SIDE CHAIN
1
A
ILE
35
34.44
42.82
3
A
ASP
34
-120.98
-52.22
3
A
ILE
35
39.60
37.91
4
A
ILE
35
-114.15
56.48
5
A
ASP
34
-139.47
-101.73
5
A
ILE
35
-153.44
10.15
5
A
PRO
37
-83.95
-91.72
6
A
ASP
34
-124.49
-97.56
6
A
ILE
35
-166.86
75.92
7
A
ILE
35
-103.34
50.31
8
A
ASP
34
-155.44
83.93
8
A
ILE
35
-91.18
30.40
8
A
PRO
37
-72.13
-80.48
10
A
GLN
33
-97.11
30.70
10
A
ILE
35
-107.62
40.24
11
A
ASP
34
-154.03
-68.04
11
A
ILE
35
37.20
47.26
12
A
ILE
35
55.70
73.79
13
A
ILE
35
57.81
13.84
14
A
ARG
3
-108.89
-62.61
14
A
ILE
35
-158.58
36.49
15
A
ASP
34
-93.40
34.65
16
A
ILE
35
61.08
81.99
17
A
ILE
35
-97.59
46.01
18
A
ILE
35
-154.20
60.79
20
A
ASP
34
-154.03
46.33
22
A
ASP
34
-59.68
-74.30
22
A
ILE
35
-175.62
-43.54
23
A
ILE
35
-149.86
28.41
24
A
ASP
34
-153.06
40.22
25
A
ASP
34
-100.87
54.44
26
A
ASP
34
-91.36
-78.48
27
A
ILE
35
-121.45
-74.59
27
A
PRO
37
-77.72
-166.53
28
A
ASP
34
-155.61
51.73
28
A
ILE
35
-115.40
50.83
29
A
ASP
34
-108.22
40.85
30
A
ILE
35
-107.42
49.52
32
A
ILE
35
-106.44
44.16
36
A
ASP
34
-157.01
51.79
37
A
ASP
34
73.08
-50.57
closest to the average, model 1
NMR structure of HCV Non-structural protein AB, NS4B(1-40)
1
N
N
A
ARG
3
A
ARG
3
HELX_P
A
ASP
34
A
ASP
34
1
1
32
MEMBRANE PROTEIN
membrane protein
POLG_HCVJF
UNP
1
1716
Q99IB8
ASRAALIEEGQRIAEMLKSKIQGLLQQASKQAQDIQPAMQ
1716
1755
2LVG
1
40
Q99IB8
A
1
1
40