1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Montserret, R.
Penin, F.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Virol.
JOVIAM
0825
0022-538X
86
7818
7828
10.1128/JVI.00457-12
22593157
Structural analysis of hepatitis C virus core-e1 signal Peptide and requirements for cleavage of the genotype 3a signal sequence by signal Peptide peptidase.
2012
10.2210/pdb2lif/pdb
pdb_00002lif
2881.539
Core protein p21
UNP residues 171-195
1
syn
polymer
Capsid protein C, p21
no
no
KKGFPFSIFLLALLSCITVPVSAAQVK
KKGFPFSIFLLALLSCITVPVSAAQVK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Core-E1 HCV signal peptide
database_2
pdbx_database_status
pdbx_nmr_software
pdbx_nmr_spectrometer
repository
Initial release
Database references
Data collection
Database references
Other
1
0
2012-07-11
1
1
2012-07-25
1
2
2023-06-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_nmr_data
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
BMRB
Y
RCSB
2011-08-29
REL
REL
REL
REL
356411
HCV
Hepatitis C virus JFH-1
sample
KK RESIDUES ARE THE N-TERMINUS SOLUBILIZATION TAG
139
0
0
53
86
0
0
21
20
structures with the least restraint violations
50
27
0.116
0.005
2D 1H-13C HSQC
2D 1H-1H NOESY
2D 1H-1H TOCSY
2D DQF-COSY
2
mM
0.01
mM
ambient
298
K
DGSA-distance geometry simulated annealing
1
closest to the average
2 mM kkgf, 0.01 mM DSS, trifluoroethanol/water
trifluoroethanol/water
Bruker Biospin
collection
TopSpin
Bruker Biospin
processing
TopSpin
Goddard
chemical shift assignment
Sparky
Goddard
data analysis
Sparky
Cornilescu, Delaglio and Bax
data analysis
TALOS
Schwieters, Kuszewski, Tjandra and Clore
structure solution
X-PLOR NIH
Koradi, Billeter and Wuthrich
structure analysis
MOLMOL
Schwieters, Kuszewski, Tjandra and Clore
refinement
Xplor
500
Bruker
AVANCE
Bruker Avance
LYS
1
n
1
LYS
1
A
LYS
2
n
2
LYS
2
A
GLY
171
n
3
GLY
171
A
PHE
172
n
4
PHE
172
A
PRO
173
n
5
PRO
173
A
PHE
174
n
6
PHE
174
A
SER
175
n
7
SER
175
A
ILE
176
n
8
ILE
176
A
PHE
177
n
9
PHE
177
A
LEU
178
n
10
LEU
178
A
LEU
179
n
11
LEU
179
A
ALA
180
n
12
ALA
180
A
LEU
181
n
13
LEU
181
A
LEU
182
n
14
LEU
182
A
SER
183
n
15
SER
183
A
CYS
184
n
16
CYS
184
A
ILE
185
n
17
ILE
185
A
THR
186
n
18
THR
186
A
VAL
187
n
19
VAL
187
A
PRO
188
n
20
PRO
188
A
VAL
189
n
21
VAL
189
A
SER
190
n
22
SER
190
A
ALA
191
n
23
ALA
191
A
ALA
192
n
24
ALA
192
A
GLN
193
n
25
GLN
193
A
VAL
194
n
26
VAL
194
A
LYS
195
n
27
LYS
195
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
closest to the average, model 1
Solution Structure of KKGF
1
N
N
A
PHE
174
A
PHE
6
HELX_P
A
THR
186
A
THR
18
1
1
13
A
PRO
188
A
PRO
20
HELX_P
A
LYS
195
A
LYS
27
1
2
8
VIRAL PROTEIN, MEMBRANE PROTEIN
Signal peptide, E1 envelope protein, Core protein, Transmembrane, membrane protein, viral protein
POLG_HCVJF
UNP
1
171
Q99IB8
GFPFSIFLLALLSCITVPVSAAQVK
171
195
2LIF
171
195
Q99IB8
A
1
3
27
1
SEE REMARK 999
LYS
1
2LIF
A
Q99IB8
UNP
1
1
SEE REMARK 999
LYS
2
2LIF
A
Q99IB8
UNP
2