1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Musi, V.
Birdsall, B.
Pastore, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Protein Sci.
PRCIEI
0795
0961-8368
15
795
807
10.1110/ps.051785506
16600966
New approaches to high-throughput structure characterization of SH3 complexes: the example of Myosin-3 and Myosin-5 SH3 domains from S. cerevisiae.
2006
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
7588.495
MYOSIN-3 ISOFORM
SH3 DOMAIN, RESIDUES 1122-1190
1
man
polymer
MYO3-SH3 DOMAIN, MYO3-SH3 ISOFORM
no
no
KDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRNTVPV
KDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRNTVPV
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
BAKER'S YEAST
sample
4932
SACCHAROMYCES CEREVISIAE
562
ESCHERICHIA COLI
citation
pdbx_database_status
pdbx_nmr_software
repository
Initial release
Version format compliance
Version format compliance
Database references
Data collection
Other
1
0
2006-04-12
1
1
2011-05-08
1
2
2011-07-13
1
3
2018-01-17
1
4
2020-01-15
_citation.page_last
_citation.pdbx_database_id_DOI
_citation.title
_pdbx_database_status.status_code_cs
_pdbx_database_status.status_code_mr
_pdbx_nmr_software.name
CRYSTAL STRUCTURE OF THE SH3 DOMAIN FROM S . CEREVISIAE MYO3
PDBE
Y
PDBE
2005-06-06
REL
REL
REL
THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY ON 13C, 15N-LABELED MYO3_SH3.
LOWEST ENERGY
50
20
1H-15N-NOESY-HSQC
1H-15N- TOCSY-HSQC
HNHA
HNHB
CBCACONH
CBCANH
HNCO
HCCH- TOCSY
2D-NOESY
2D COSY
2D-TOCSY
50
mM
7.0
pH
1.0
atm
298.0
K
ARIA 1.2
1
90% WATER/10% D2O
LINGE,HABECK,RIEPING,NILGES
refinement
ARIA
1.2
structure solution
XEASY
structure solution
Sparky
500
Varian
INOVA
600
Varian
INOVA
800
Varian
INOVA
LYS
1122
n
1
LYS
1122
A
ASP
1123
n
2
ASP
1123
A
PRO
1124
n
3
PRO
1124
A
LYS
1125
n
4
LYS
1125
A
PHE
1126
n
5
PHE
1126
A
GLU
1127
n
6
GLU
1127
A
ALA
1128
n
7
ALA
1128
A
ALA
1129
n
8
ALA
1129
A
TYR
1130
n
9
TYR
1130
A
ASP
1131
n
10
ASP
1131
A
PHE
1132
n
11
PHE
1132
A
PRO
1133
n
12
PRO
1133
A
GLY
1134
n
13
GLY
1134
A
SER
1135
n
14
SER
1135
A
GLY
1136
n
15
GLY
1136
A
SER
1137
n
16
SER
1137
A
SER
1138
n
17
SER
1138
A
SER
1139
n
18
SER
1139
A
GLU
1140
n
19
GLU
1140
A
LEU
1141
n
20
LEU
1141
A
PRO
1142
n
21
PRO
1142
A
LEU
1143
n
22
LEU
1143
A
LYS
1144
n
23
LYS
1144
A
LYS
1145
n
24
LYS
1145
A
GLY
1146
n
25
GLY
1146
A
ASP
1147
n
26
ASP
1147
A
ILE
1148
n
27
ILE
1148
A
VAL
1149
n
28
VAL
1149
A
PHE
1150
n
29
PHE
1150
A
ILE
1151
n
30
ILE
1151
A
SER
1152
n
31
SER
1152
A
ARG
1153
n
32
ARG
1153
A
ASP
1154
n
33
ASP
1154
A
GLU
1155
n
34
GLU
1155
A
PRO
1156
n
35
PRO
1156
A
SER
1157
n
36
SER
1157
A
GLY
1158
n
37
GLY
1158
A
TRP
1159
n
38
TRP
1159
A
SER
1160
n
39
SER
1160
A
LEU
1161
n
40
LEU
1161
A
ALA
1162
n
41
ALA
1162
A
LYS
1163
n
42
LYS
1163
A
LEU
1164
n
43
LEU
1164
A
LEU
1165
n
44
LEU
1165
A
ASP
1166
n
45
ASP
1166
A
GLY
1167
n
46
GLY
1167
A
SER
1168
n
47
SER
1168
A
LYS
1169
n
48
LYS
1169
A
GLU
1170
n
49
GLU
1170
A
GLY
1171
n
50
GLY
1171
A
TRP
1172
n
51
TRP
1172
A
VAL
1173
n
52
VAL
1173
A
PRO
1174
n
53
PRO
1174
A
THR
1175
n
54
THR
1175
A
ALA
1176
n
55
ALA
1176
A
TYR
1177
n
56
TYR
1177
A
MET
1178
n
57
MET
1178
A
THR
1179
n
58
THR
1179
A
PRO
1180
n
59
PRO
1180
A
TYR
1181
n
60
TYR
1181
A
LYS
1182
n
61
LYS
1182
A
ASP
1183
n
62
ASP
1183
A
THR
1184
n
63
THR
1184
A
ARG
1185
n
64
ARG
1185
A
ASN
1186
n
65
ASN
1186
A
THR
1187
n
66
THR
1187
A
VAL
1188
n
67
VAL
1188
A
PRO
1189
n
68
PRO
1189
A
VAL
1190
n
69
VAL
1190
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
1173
A
N
VAL
52
A
O
SER
1160
A
O
SER
39
A
N
LYS
1163
A
N
LYS
42
A
O
PHE
1150
A
O
PHE
29
A
N
VAL
1149
A
N
VAL
28
A
O
PHE
1126
A
O
PHE
5
A
N
GLU
1127
A
N
GLU
6
A
O
THR
1179
A
O
THR
58
1
A
A
OD2
HZ2
ASP
LYS
1123
1163
1.60
3
A
A
H
OE1
SER
GLU
1138
1140
1.60
4
A
A
HZ1
OD2
LYS
ASP
1144
1147
1.56
11
A
A
OD2
HG
ASP
SER
1154
1160
1.60
12
A
A
HG
OE1
SER
GLU
1137
1140
1.59
16
A
A
HZ1
OD2
LYS
ASP
1122
1123
1.60
1
A
SER
1137
50.28
-166.11
1
A
SER
1138
70.88
-62.36
1
A
LYS
1145
-55.29
107.72
1
A
PRO
1156
-66.91
6.14
1
A
THR
1187
-49.53
108.77
2
A
SER
1135
-78.76
42.98
2
A
LYS
1145
-50.42
109.05
2
A
PRO
1156
-64.39
3.01
2
A
LEU
1164
-49.35
150.26
2
A
LYS
1182
-69.30
84.59
3
A
SER
1138
-151.85
53.79
3
A
LYS
1145
-48.75
104.31
3
A
PRO
1156
-63.93
3.20
3
A
LYS
1182
-63.86
83.83
3
A
ASP
1183
-126.71
-70.14
3
A
THR
1187
78.37
122.54
4
A
SER
1138
70.90
-82.55
4
A
LYS
1145
-57.76
100.60
4
A
LYS
1182
-65.77
83.84
4
A
ASP
1183
-141.21
-68.01
4
A
THR
1187
75.64
-44.21
5
A
SER
1137
-72.24
-168.04
5
A
SER
1138
-49.94
-74.78
5
A
LYS
1145
-51.90
106.19
5
A
PRO
1156
-66.55
4.95
5
A
THR
1184
-87.65
39.42
5
A
ARG
1185
-149.51
-65.09
6
A
LYS
1145
-52.67
107.46
6
A
PRO
1156
-65.82
6.71
6
A
LYS
1182
-60.10
84.33
6
A
ASN
1186
-120.12
-52.06
7
A
SER
1138
67.84
-70.22
7
A
SER
1139
-81.30
30.37
7
A
LYS
1182
-67.26
83.00
8
A
SER
1138
-142.93
38.19
8
A
LYS
1145
-59.35
104.74
8
A
PRO
1156
-66.92
5.14
8
A
THR
1184
-48.45
102.35
8
A
ASN
1186
-123.30
-55.51
8
A
THR
1187
-143.22
-68.93
9
A
PRO
1133
-69.63
76.32
9
A
SER
1135
-54.13
89.78
9
A
PRO
1156
-64.12
1.16
9
A
LYS
1169
-171.50
130.49
9
A
ASP
1183
-88.39
-81.36
9
A
ARG
1185
178.15
-33.34
10
A
PRO
1133
-69.22
95.58
10
A
SER
1135
-164.35
21.13
10
A
SER
1138
-152.89
49.60
10
A
PRO
1142
-59.23
109.92
10
A
LYS
1145
-49.43
108.60
10
A
PRO
1156
-64.48
1.38
10
A
LYS
1169
-174.00
135.30
11
A
PRO
1133
-69.99
50.80
11
A
SER
1138
-121.11
-68.94
11
A
LYS
1145
-55.72
109.65
11
A
PRO
1156
-65.66
4.40
11
A
ARG
1185
-84.54
39.50
12
A
LYS
1145
-59.89
106.03
12
A
PRO
1156
-67.49
4.09
12
A
LYS
1182
-67.63
84.05
12
A
ASP
1183
-130.95
-60.04
13
A
SER
1137
-103.55
-155.82
13
A
LYS
1145
-54.40
102.95
13
A
LYS
1182
-67.39
95.61
14
A
SER
1135
-92.21
-62.56
14
A
SER
1137
59.77
16.71
14
A
LYS
1145
-52.30
107.25
14
A
LYS
1182
-69.31
83.71
14
A
ASN
1186
74.24
-46.28
15
A
SER
1135
67.71
-74.02
15
A
LYS
1145
-47.57
103.16
15
A
PRO
1156
-67.35
13.70
16
A
SER
1135
-68.45
82.57
16
A
LYS
1145
-53.29
106.08
16
A
LYS
1169
-177.64
135.17
16
A
THR
1184
63.56
-86.26
16
A
ARG
1185
66.59
-62.01
16
A
ASN
1186
-49.49
104.98
17
A
PRO
1133
-61.24
95.98
17
A
SER
1137
-117.61
-71.69
17
A
SER
1138
178.24
-80.41
17
A
SER
1139
-104.14
45.17
17
A
LYS
1145
-57.56
105.71
17
A
LEU
1164
-47.64
150.91
17
A
THR
1184
71.86
-1.83
18
A
PRO
1133
-40.14
-71.56
18
A
SER
1135
48.87
23.75
18
A
SER
1138
-142.37
49.26
18
A
LYS
1145
-44.34
107.06
18
A
PRO
1156
-65.11
2.28
18
A
THR
1184
52.96
-166.71
18
A
ARG
1185
61.35
82.28
19
A
LYS
1145
-58.08
106.14
20
A
PRO
1133
-74.51
36.68
20
A
SER
1135
-145.51
16.30
20
A
SER
1139
-117.59
50.84
20
A
LYS
1145
-55.52
108.78
20
A
PRO
1156
-63.75
0.84
20
A
PRO
1174
-68.91
89.08
20
A
THR
1175
30.04
-81.09
20
A
THR
1187
-155.44
-44.49
MYOSIN-3 ISOFORM
NMR Structure of MYO3-SH3 domain from Myosin-typeI from S. cerevisiae
1
N
N
CONTRACTILE PROTEIN
SH3 DOMAIN, MYOSIN-TYPE I, MUSCLE PROTEIN, CONTRACTILE PROTEIN, ACTIN-BINDING, ATP-BINDING, MOTOR PROTEIN, MYOSIN, NUCLEOTIDE-BINDING, PHOSPHORYLATION
MYO3_YEAST
UNP
1
P36006
1122
1190
2BTT
1122
1190
P36006
A
1
1
69
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
1170
A
GLU
49
A
PRO
1174
A
PRO
53
A
TRP
1159
A
TRP
38
A
LEU
1164
A
LEU
43
A
ILE
1148
A
ILE
27
A
GLU
1155
A
GLU
34
A
LYS
1125
A
LYS
4
A
ALA
1128
A
ALA
7
A
MET
1178
A
MET
57
A
PRO
1180
A
PRO
59
1
P 1