0.019706
0.000000
0.000000
0.000000
0.017299
0.000000
0.000000
0.000000
0.016127
0.00000
0.00000
0.00000
King, N.M.
Prabu-Jeyabalan, M.
Nalivaika, E.A.
Wigernick, P.B.
de Bethune, M.P.
Schiffer, C.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
50.746
57.807
62.006
C27 H37 N3 O7 S
547.664
(3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE
Darunavir; TMC114; UIC-94017
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
Y
2
N
C
Y
3
N
C
Y
4
N
C
Y
5
N
C
Y
6
N
C
Y
7
N
C
N
8
N
S
N
9
N
O
N
10
N
O
N
11
N
N
N
12
N
C
N
13
N
C
N
14
N
C
N
15
N
C
N
16
N
C
N
17
R
C
N
18
N
O
N
19
S
C
N
20
N
N
N
21
N
C
N
22
N
O
N
23
N
O
N
24
R
C
N
25
N
C
N
26
N
O
N
27
R
C
N
28
N
O
N
29
N
C
N
30
N
C
N
31
S
C
N
32
N
C
Y
33
N
C
Y
34
N
C
Y
35
N
C
Y
36
N
C
Y
37
N
C
Y
38
N
C
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
N
N
77
S
C
N
78
N
C
N
79
N
O
N
80
N
C
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
N
N
90
S
C
N
91
N
C
N
92
N
O
N
93
N
C
N
94
N
C
N
95
N
C
N
96
N
N
N
97
N
C
N
98
N
N
N
99
N
N
N
100
N
O
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
S
C
N
118
N
C
N
119
N
O
N
120
N
C
N
121
N
C
N
122
N
O
N
123
N
N
N
124
N
O
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
N
N
134
S
C
N
135
N
C
N
136
N
O
N
137
N
C
N
138
N
C
N
139
N
O
N
140
N
O
N
141
N
O
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
N
N
150
R
C
N
151
N
C
N
152
N
O
N
153
N
C
N
154
N
S
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
N
N
164
S
C
N
165
N
C
N
166
N
O
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
N
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
O
N
191
N
O
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
N
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
O
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
N
N
213
S
C
N
214
N
C
N
215
N
O
N
216
N
C
Y
217
N
C
Y
218
N
N
Y
219
N
C
Y
220
N
C
Y
221
N
N
N
222
N
O
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
S
C
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
N
N
259
S
C
N
260
N
C
N
261
N
O
N
262
N
C
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
N
285
N
C
N
286
N
C
N
287
N
C
N
288
N
N
N
289
N
O
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
N
310
N
C
N
311
N
S
N
312
N
C
N
313
N
O
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
N
N
326
S
C
N
327
N
C
N
328
N
O
N
329
N
C
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
P
N
349
N
O
N
350
N
O
N
351
N
O
N
352
N
O
N
353
N
N
N
354
S
C
N
355
N
C
N
356
N
O
N
357
N
C
N
358
N
C
N
359
N
C
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
N
N
371
S
C
N
372
N
C
N
373
N
O
N
374
R
C
N
375
N
O
N
376
N
C
N
377
N
O
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
N
N
388
S
C
N
389
N
C
N
390
N
O
N
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
N
Y
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
N
401
N
O
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
N
N
415
S
C
N
416
N
C
N
417
N
O
N
418
N
C
Y
419
N
C
Y
420
N
C
Y
421
N
C
Y
422
N
C
Y
423
N
C
Y
424
N
C
N
425
N
O
N
426
N
O
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
N
N
439
S
C
N
440
N
C
N
441
N
O
N
442
N
C
N
443
N
C
N
444
N
C
N
445
N
O
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
Y
4
N
doub
Y
5
N
sing
Y
6
N
sing
N
7
N
sing
Y
8
N
doub
N
9
N
sing
Y
10
N
sing
N
11
N
sing
Y
12
N
doub
N
13
N
sing
N
14
N
sing
N
15
N
doub
N
16
N
doub
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
doub
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
Y
68
N
doub
Y
69
N
sing
N
70
N
sing
Y
71
N
sing
N
72
N
sing
Y
73
N
doub
N
74
N
sing
Y
75
N
sing
N
76
N
sing
Y
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
doub
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
doub
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
doub
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
doub
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
doub
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
doub
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
doub
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
Y
218
N
sing
Y
219
N
doub
Y
220
N
doub
N
221
N
sing
Y
222
N
sing
N
223
N
sing
Y
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
doub
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
doub
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
Y
326
N
doub
Y
327
N
sing
Y
328
N
sing
N
329
N
sing
Y
330
N
doub
N
331
N
sing
Y
332
N
doub
N
333
N
sing
Y
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
doub
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
doub
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
doub
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
doub
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
Y
386
N
doub
Y
387
N
sing
Y
388
N
sing
N
389
N
sing
Y
390
N
doub
Y
391
N
sing
Y
392
N
sing
N
393
N
sing
Y
394
N
sing
Y
395
N
doub
N
396
N
sing
Y
397
N
doub
N
398
N
sing
Y
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
doub
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
Y
414
N
doub
Y
415
N
sing
Y
416
N
sing
N
417
N
sing
Y
418
N
doub
N
419
N
sing
Y
420
N
doub
N
421
N
sing
Y
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
doub
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
US
J.Med.Chem.
JMCMAR
0151
0022-2623
48
1813
1822
10.1021/jm049560p
15771427
Discovery and selection of TMC114, a next generation HIV-1 protease inhibitor
2005
10.2210/pdb1t3r/pdb
pdb_00001t3r
190
1
CCD
SINGLE WAVELENGTH
M
x-ray
1
0.900
1.0
5.0.1
ALS
0.900
SYNCHROTRON
ALS BEAMLINE 5.0.1
complexed with TMC114
10801.763
protease RETROPEPSIN
3.4.23.16
Q7K,L63P
2
man
polymer
94.971
PHOSPHATE ION
5
syn
non-polymer
547.664
(3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE
1
syn
non-polymer
18.015
water
259
nat
water
HIV-1 PROTEASE
E.C.3.4.23.16
no
no
PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPVEICGHKAIGTVLVGPT
PVNIIGRNLLTQIGCTLNF
PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPVEICGHKAIGTVLVGPT
PVNIIGRNLLTQIGCTLNF
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Lentivirus
Escherichia
sample
gag-pol
11676
Human immunodeficiency virus 1
562
Escherichia coli
plasmid
p566
1
2.10
41.56
VAPOR DIFFUSION, HANGING DROP
6.2
1 MG/ML PROTEIN; 5:1 LIGAND:PROTEIN; 30% AMSOR; SODIUM CITRATE AND SODIUM PHOSPHATE, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 300K
300
chem_comp
database_2
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Non-polymer description
Version format compliance
Database references
Derived calculations
Structure summary
Data collection
Refinement description
1
0
2005-05-03
1
1
2008-04-30
1
2
2011-07-13
1
3
2021-10-27
1
4
2023-08-23
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
USED AS STARTING MODEL FOR MOLECULAR REPLACEMENT
N
RCSB
Y
RCSB
2004-04-27
REL
PO4
PHOSPHATE ION
017
(3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE
HOH
water
1F7A
PDB
experimental model
PO4
502
2
PO4
PO4
502
A
PO4
504
2
PO4
PO4
504
A
PO4
505
2
PO4
PO4
505
A
017
1200
3
017
017
1200
A
PO4
501
2
PO4
PO4
501
B
PO4
503
2
PO4
PO4
503
B
HOH
1
4
HOH
HOH
1201
A
HOH
2
4
HOH
HOH
1202
A
HOH
4
4
HOH
HOH
1203
A
HOH
6
4
HOH
HOH
1204
A
HOH
7
4
HOH
HOH
1205
A
HOH
8
4
HOH
HOH
1206
A
HOH
11
4
HOH
HOH
1207
A
HOH
14
4
HOH
HOH
1208
A
HOH
16
4
HOH
HOH
1209
A
HOH
20
4
HOH
HOH
1210
A
HOH
21
4
HOH
HOH
1211
A
HOH
22
4
HOH
HOH
1212
A
HOH
24
4
HOH
HOH
1213
A
HOH
25
4
HOH
HOH
1214
A
HOH
27
4
HOH
HOH
1215
A
HOH
30
4
HOH
HOH
1216
A
HOH
31
4
HOH
HOH
1217
A
HOH
36
4
HOH
HOH
1218
A
HOH
44
4
HOH
HOH
1219
A
HOH
46
4
HOH
HOH
1220
A
HOH
47
4
HOH
HOH
1221
A
HOH
48
4
HOH
HOH
1222
A
HOH
50
4
HOH
HOH
1223
A
HOH
54
4
HOH
HOH
1224
A
HOH
59
4
HOH
HOH
1225
A
HOH
65
4
HOH
HOH
1226
A
HOH
67
4
HOH
HOH
1227
A
HOH
73
4
HOH
HOH
1228
A
HOH
74
4
HOH
HOH
1229
A
HOH
76
4
HOH
HOH
1230
A
HOH
77
4
HOH
HOH
1231
A
HOH
78
4
HOH
HOH
1232
A
HOH
79
4
HOH
HOH
1233
A
HOH
81
4
HOH
HOH
1234
A
HOH
82
4
HOH
HOH
1235
A
HOH
83
4
HOH
HOH
1236
A
HOH
84
4
HOH
HOH
1237
A
HOH
85
4
HOH
HOH
1238
A
HOH
86
4
HOH
HOH
1239
A
HOH
88
4
HOH
HOH
1240
A
HOH
90
4
HOH
HOH
1241
A
HOH
92
4
HOH
HOH
1242
A
HOH
93
4
HOH
HOH
1243
A
HOH
94
4
HOH
HOH
1244
A
HOH
97
4
HOH
HOH
1245
A
HOH
98
4
HOH
HOH
1246
A
HOH
99
4
HOH
HOH
1247
A
HOH
100
4
HOH
HOH
1248
A
HOH
101
4
HOH
HOH
1249
A
HOH
102
4
HOH
HOH
1250
A
HOH
103
4
HOH
HOH
1251
A
HOH
105
4
HOH
HOH
1252
A
HOH
106
4
HOH
HOH
1253
A
HOH
111
4
HOH
HOH
1254
A
HOH
114
4
HOH
HOH
1255
A
HOH
116
4
HOH
HOH
1256
A
HOH
118
4
HOH
HOH
1257
A
HOH
123
4
HOH
HOH
1258
A
HOH
125
4
HOH
HOH
1259
A
HOH
127
4
HOH
HOH
1260
A
HOH
128
4
HOH
HOH
1261
A
HOH
129
4
HOH
HOH
1262
A
HOH
130
4
HOH
HOH
1263
A
HOH
133
4
HOH
HOH
1264
A
HOH
135
4
HOH
HOH
1265
A
HOH
138
4
HOH
HOH
1266
A
HOH
139
4
HOH
HOH
1267
A
HOH
141
4
HOH
HOH
1268
A
HOH
144
4
HOH
HOH
1269
A
HOH
145
4
HOH
HOH
1270
A
HOH
149
4
HOH
HOH
1271
A
HOH
152
4
HOH
HOH
1272
A
HOH
153
4
HOH
HOH
1273
A
HOH
154
4
HOH
HOH
1274
A
HOH
155
4
HOH
HOH
1275
A
HOH
157
4
HOH
HOH
1276
A
HOH
159
4
HOH
HOH
1277
A
HOH
164
4
HOH
HOH
1278
A
HOH
167
4
HOH
HOH
1279
A
HOH
169
4
HOH
HOH
1280
A
HOH
170
4
HOH
HOH
1281
A
HOH
173
4
HOH
HOH
1282
A
HOH
176
4
HOH
HOH
1283
A
HOH
177
4
HOH
HOH
1284
A
HOH
179
4
HOH
HOH
1285
A
HOH
180
4
HOH
HOH
1286
A
HOH
182
4
HOH
HOH
1287
A
HOH
183
4
HOH
HOH
1288
A
HOH
184
4
HOH
HOH
1289
A
HOH
185
4
HOH
HOH
1290
A
HOH
187
4
HOH
HOH
1291
A
HOH
188
4
HOH
HOH
1292
A
HOH
195
4
HOH
HOH
1293
A
HOH
197
4
HOH
HOH
1294
A
HOH
199
4
HOH
HOH
1295
A
HOH
202
4
HOH
HOH
1296
A
HOH
208
4
HOH
HOH
1297
A
HOH
209
4
HOH
HOH
1298
A
HOH
211
4
HOH
HOH
1299
A
HOH
215
4
HOH
HOH
1300
A
HOH
216
4
HOH
HOH
1301
A
HOH
217
4
HOH
HOH
1302
A
HOH
218
4
HOH
HOH
1303
A
HOH
219
4
HOH
HOH
1304
A
HOH
222
4
HOH
HOH
1305
A
HOH
223
4
HOH
HOH
1306
A
HOH
224
4
HOH
HOH
1307
A
HOH
228
4
HOH
HOH
1308
A
HOH
231
4
HOH
HOH
1309
A
HOH
233
4
HOH
HOH
1310
A
HOH
234
4
HOH
HOH
1311
A
HOH
238
4
HOH
HOH
1312
A
HOH
248
4
HOH
HOH
1313
A
HOH
251
4
HOH
HOH
1314
A
HOH
253
4
HOH
HOH
1315
A
HOH
254
4
HOH
HOH
1316
A
HOH
258
4
HOH
HOH
1317
A
HOH
259
4
HOH
HOH
1318
A
HOH
260
4
HOH
HOH
1319
A
HOH
263
4
HOH
HOH
1320
A
HOH
264
4
HOH
HOH
1321
A
HOH
268
4
HOH
HOH
1322
A
HOH
269
4
HOH
HOH
1323
A
HOH
270
4
HOH
HOH
1324
A
HOH
285
4
HOH
HOH
1325
A
HOH
288
4
HOH
HOH
1326
A
HOH
289
4
HOH
HOH
1327
A
HOH
296
4
HOH
HOH
1328
A
HOH
297
4
HOH
HOH
1329
A
HOH
298
4
HOH
HOH
1330
A
HOH
299
4
HOH
HOH
1331
A
HOH
302
4
HOH
HOH
1332
A
HOH
303
4
HOH
HOH
1333
A
HOH
3
4
HOH
HOH
504
B
HOH
5
4
HOH
HOH
505
B
HOH
9
4
HOH
HOH
506
B
HOH
10
4
HOH
HOH
507
B
HOH
12
4
HOH
HOH
508
B
HOH
13
4
HOH
HOH
509
B
HOH
17
4
HOH
HOH
510
B
HOH
18
4
HOH
HOH
511
B
HOH
19
4
HOH
HOH
512
B
HOH
23
4
HOH
HOH
513
B
HOH
26
4
HOH
HOH
514
B
HOH
28
4
HOH
HOH
515
B
HOH
29
4
HOH
HOH
516
B
HOH
32
4
HOH
HOH
517
B
HOH
33
4
HOH
HOH
518
B
HOH
34
4
HOH
HOH
519
B
HOH
35
4
HOH
HOH
520
B
HOH
37
4
HOH
HOH
521
B
HOH
38
4
HOH
HOH
522
B
HOH
39
4
HOH
HOH
523
B
HOH
40
4
HOH
HOH
524
B
HOH
41
4
HOH
HOH
525
B
HOH
42
4
HOH
HOH
526
B
HOH
43
4
HOH
HOH
527
B
HOH
45
4
HOH
HOH
528
B
HOH
49
4
HOH
HOH
529
B
HOH
51
4
HOH
HOH
530
B
HOH
53
4
HOH
HOH
531
B
HOH
57
4
HOH
HOH
532
B
HOH
58
4
HOH
HOH
533
B
HOH
62
4
HOH
HOH
534
B
HOH
64
4
HOH
HOH
535
B
HOH
66
4
HOH
HOH
536
B
HOH
68
4
HOH
HOH
537
B
HOH
69
4
HOH
HOH
538
B
HOH
70
4
HOH
HOH
539
B
HOH
71
4
HOH
HOH
540
B
HOH
75
4
HOH
HOH
541
B
HOH
87
4
HOH
HOH
542
B
HOH
89
4
HOH
HOH
543
B
HOH
91
4
HOH
HOH
544
B
HOH
96
4
HOH
HOH
545
B
HOH
104
4
HOH
HOH
546
B
HOH
108
4
HOH
HOH
547
B
HOH
110
4
HOH
HOH
548
B
HOH
112
4
HOH
HOH
549
B
HOH
115
4
HOH
HOH
550
B
HOH
117
4
HOH
HOH
551
B
HOH
119
4
HOH
HOH
552
B
HOH
121
4
HOH
HOH
553
B
HOH
122
4
HOH
HOH
554
B
HOH
124
4
HOH
HOH
555
B
HOH
126
4
HOH
HOH
556
B
HOH
131
4
HOH
HOH
557
B
HOH
132
4
HOH
HOH
558
B
HOH
134
4
HOH
HOH
559
B
HOH
136
4
HOH
HOH
560
B
HOH
137
4
HOH
HOH
561
B
HOH
140
4
HOH
HOH
562
B
HOH
142
4
HOH
HOH
563
B
HOH
143
4
HOH
HOH
564
B
HOH
1145
4
HOH
HOH
565
B
HOH
146
4
HOH
HOH
566
B
HOH
147
4
HOH
HOH
567
B
HOH
148
4
HOH
HOH
568
B
HOH
150
4
HOH
HOH
569
B
HOH
151
4
HOH
HOH
570
B
HOH
158
4
HOH
HOH
571
B
HOH
160
4
HOH
HOH
572
B
HOH
161
4
HOH
HOH
573
B
HOH
162
4
HOH
HOH
574
B
HOH
163
4
HOH
HOH
575
B
HOH
166
4
HOH
HOH
576
B
HOH
168
4
HOH
HOH
577
B
HOH
172
4
HOH
HOH
578
B
HOH
174
4
HOH
HOH
579
B
HOH
175
4
HOH
HOH
580
B
HOH
178
4
HOH
HOH
581
B
HOH
181
4
HOH
HOH
582
B
HOH
186
4
HOH
HOH
583
B
HOH
189
4
HOH
HOH
584
B
HOH
191
4
HOH
HOH
585
B
HOH
193
4
HOH
HOH
586
B
HOH
194
4
HOH
HOH
587
B
HOH
196
4
HOH
HOH
588
B
HOH
198
4
HOH
HOH
589
B
HOH
201
4
HOH
HOH
590
B
HOH
203
4
HOH
HOH
591
B
HOH
204
4
HOH
HOH
592
B
HOH
205
4
HOH
HOH
593
B
HOH
206
4
HOH
HOH
594
B
HOH
207
4
HOH
HOH
595
B
HOH
210
4
HOH
HOH
596
B
HOH
212
4
HOH
HOH
597
B
HOH
213
4
HOH
HOH
598
B
HOH
220
4
HOH
HOH
599
B
HOH
221
4
HOH
HOH
600
B
HOH
225
4
HOH
HOH
601
B
HOH
226
4
HOH
HOH
602
B
HOH
227
4
HOH
HOH
603
B
HOH
235
4
HOH
HOH
604
B
HOH
237
4
HOH
HOH
605
B
HOH
239
4
HOH
HOH
606
B
HOH
249
4
HOH
HOH
607
B
HOH
255
4
HOH
HOH
608
B
HOH
256
4
HOH
HOH
609
B
HOH
257
4
HOH
HOH
610
B
HOH
265
4
HOH
HOH
611
B
HOH
267
4
HOH
HOH
612
B
HOH
271
4
HOH
HOH
613
B
HOH
272
4
HOH
HOH
614
B
HOH
274
4
HOH
HOH
615
B
HOH
276
4
HOH
HOH
616
B
HOH
277
4
HOH
HOH
617
B
HOH
278
4
HOH
HOH
618
B
HOH
279
4
HOH
HOH
619
B
HOH
280
4
HOH
HOH
620
B
HOH
282
4
HOH
HOH
621
B
HOH
283
4
HOH
HOH
622
B
HOH
284
4
HOH
HOH
623
B
HOH
286
4
HOH
HOH
624
B
HOH
287
4
HOH
HOH
625
B
HOH
291
4
HOH
HOH
626
B
HOH
292
4
HOH
HOH
627
B
HOH
295
4
HOH
HOH
628
B
HOH
400
4
HOH
HOH
629
B
PRO
1
n
1
PRO
1
A
GLN
2
n
2
GLN
2
A
ILE
3
n
3
ILE
3
A
THR
4
n
4
THR
4
A
LEU
5
n
5
LEU
5
A
TRP
6
n
6
TRP
6
A
LYS
7
n
7
LYS
7
A
ARG
8
n
8
ARG
8
A
PRO
9
n
9
PRO
9
A
LEU
10
n
10
LEU
10
A
VAL
11
n
11
VAL
11
A
THR
12
n
12
THR
12
A
ILE
13
n
13
ILE
13
A
ARG
14
n
14
ARG
14
A
ILE
15
n
15
ILE
15
A
GLY
16
n
16
GLY
16
A
GLY
17
n
17
GLY
17
A
GLN
18
n
18
GLN
18
A
LEU
19
n
19
LEU
19
A
LYS
20
n
20
LYS
20
A
GLU
21
n
21
GLU
21
A
ALA
22
n
22
ALA
22
A
LEU
23
n
23
LEU
23
A
LEU
24
n
24
LEU
24
A
ASP
25
n
25
ASP
25
A
THR
26
n
26
THR
26
A
GLY
27
n
27
GLY
27
A
ALA
28
n
28
ALA
28
A
ASP
29
n
29
ASP
29
A
ASP
30
n
30
ASP
30
A
THR
31
n
31
THR
31
A
VAL
32
n
32
VAL
32
A
LEU
33
n
33
LEU
33
A
GLU
34
n
34
GLU
34
A
GLU
35
n
35
GLU
35
A
MET
36
n
36
MET
36
A
ASN
37
n
37
ASN
37
A
LEU
38
n
38
LEU
38
A
PRO
39
n
39
PRO
39
A
GLY
40
n
40
GLY
40
A
LYS
41
n
41
LYS
41
A
TRP
42
n
42
TRP
42
A
LYS
43
n
43
LYS
43
A
PRO
44
n
44
PRO
44
A
LYS
45
n
45
LYS
45
A
MET
46
n
46
MET
46
A
ILE
47
n
47
ILE
47
A
GLY
48
n
48
GLY
48
A
GLY
49
n
49
GLY
49
A
ILE
50
n
50
ILE
50
A
GLY
51
n
51
GLY
51
A
GLY
52
n
52
GLY
52
A
PHE
53
n
53
PHE
53
A
ILE
54
n
54
ILE
54
A
LYS
55
n
55
LYS
55
A
VAL
56
n
56
VAL
56
A
ARG
57
n
57
ARG
57
A
GLN
58
n
58
GLN
58
A
TYR
59
n
59
TYR
59
A
ASP
60
n
60
ASP
60
A
GLN
61
n
61
GLN
61
A
ILE
62
n
62
ILE
62
A
PRO
63
n
63
PRO
63
A
VAL
64
n
64
VAL
64
A
GLU
65
n
65
GLU
65
A
ILE
66
n
66
ILE
66
A
CYS
67
n
67
CYS
67
A
GLY
68
n
68
GLY
68
A
HIS
69
n
69
HIS
69
A
LYS
70
n
70
LYS
70
A
ALA
71
n
71
ALA
71
A
ILE
72
n
72
ILE
72
A
GLY
73
n
73
GLY
73
A
THR
74
n
74
THR
74
A
VAL
75
n
75
VAL
75
A
LEU
76
n
76
LEU
76
A
VAL
77
n
77
VAL
77
A
GLY
78
n
78
GLY
78
A
PRO
79
n
79
PRO
79
A
THR
80
n
80
THR
80
A
PRO
81
n
81
PRO
81
A
VAL
82
n
82
VAL
82
A
ASN
83
n
83
ASN
83
A
ILE
84
n
84
ILE
84
A
ILE
85
n
85
ILE
85
A
GLY
86
n
86
GLY
86
A
ARG
87
n
87
ARG
87
A
ASN
88
n
88
ASN
88
A
LEU
89
n
89
LEU
89
A
LEU
90
n
90
LEU
90
A
THR
91
n
91
THR
91
A
GLN
92
n
92
GLN
92
A
ILE
93
n
93
ILE
93
A
GLY
94
n
94
GLY
94
A
CYS
95
n
95
CYS
95
A
THR
96
n
96
THR
96
A
LEU
97
n
97
LEU
97
A
ASN
98
n
98
ASN
98
A
PHE
99
n
99
PHE
99
A
PRO
1
n
1
PRO
1
B
GLN
2
n
2
GLN
2
B
ILE
3
n
3
ILE
3
B
THR
4
n
4
THR
4
B
LEU
5
n
5
LEU
5
B
TRP
6
n
6
TRP
6
B
LYS
7
n
7
LYS
7
B
ARG
8
n
8
ARG
8
B
PRO
9
n
9
PRO
9
B
LEU
10
n
10
LEU
10
B
VAL
11
n
11
VAL
11
B
THR
12
n
12
THR
12
B
ILE
13
n
13
ILE
13
B
ARG
14
n
14
ARG
14
B
ILE
15
n
15
ILE
15
B
GLY
16
n
16
GLY
16
B
GLY
17
n
17
GLY
17
B
GLN
18
n
18
GLN
18
B
LEU
19
n
19
LEU
19
B
LYS
20
n
20
LYS
20
B
GLU
21
n
21
GLU
21
B
ALA
22
n
22
ALA
22
B
LEU
23
n
23
LEU
23
B
LEU
24
n
24
LEU
24
B
ASP
25
n
25
ASP
25
B
THR
26
n
26
THR
26
B
GLY
27
n
27
GLY
27
B
ALA
28
n
28
ALA
28
B
ASP
29
n
29
ASP
29
B
ASP
30
n
30
ASP
30
B
THR
31
n
31
THR
31
B
VAL
32
n
32
VAL
32
B
LEU
33
n
33
LEU
33
B
GLU
34
n
34
GLU
34
B
GLU
35
n
35
GLU
35
B
MET
36
n
36
MET
36
B
ASN
37
n
37
ASN
37
B
LEU
38
n
38
LEU
38
B
PRO
39
n
39
PRO
39
B
GLY
40
n
40
GLY
40
B
LYS
41
n
41
LYS
41
B
TRP
42
n
42
TRP
42
B
LYS
43
n
43
LYS
43
B
PRO
44
n
44
PRO
44
B
LYS
45
n
45
LYS
45
B
MET
46
n
46
MET
46
B
ILE
47
n
47
ILE
47
B
GLY
48
n
48
GLY
48
B
GLY
49
n
49
GLY
49
B
ILE
50
n
50
ILE
50
B
GLY
51
n
51
GLY
51
B
GLY
52
n
52
GLY
52
B
PHE
53
n
53
PHE
53
B
ILE
54
n
54
ILE
54
B
LYS
55
n
55
LYS
55
B
VAL
56
n
56
VAL
56
B
ARG
57
n
57
ARG
57
B
GLN
58
n
58
GLN
58
B
TYR
59
n
59
TYR
59
B
ASP
60
n
60
ASP
60
B
GLN
61
n
61
GLN
61
B
ILE
62
n
62
ILE
62
B
PRO
63
n
63
PRO
63
B
VAL
64
n
64
VAL
64
B
GLU
65
n
65
GLU
65
B
ILE
66
n
66
ILE
66
B
CYS
67
n
67
CYS
67
B
GLY
68
n
68
GLY
68
B
HIS
69
n
69
HIS
69
B
LYS
70
n
70
LYS
70
B
ALA
71
n
71
ALA
71
B
ILE
72
n
72
ILE
72
B
GLY
73
n
73
GLY
73
B
THR
74
n
74
THR
74
B
VAL
75
n
75
VAL
75
B
LEU
76
n
76
LEU
76
B
VAL
77
n
77
VAL
77
B
GLY
78
n
78
GLY
78
B
PRO
79
n
79
PRO
79
B
THR
80
n
80
THR
80
B
PRO
81
n
81
PRO
81
B
VAL
82
n
82
VAL
82
B
ASN
83
n
83
ASN
83
B
ILE
84
n
84
ILE
84
B
ILE
85
n
85
ILE
85
B
GLY
86
n
86
GLY
86
B
ARG
87
n
87
ARG
87
B
ASN
88
n
88
ASN
88
B
LEU
89
n
89
LEU
89
B
LEU
90
n
90
LEU
90
B
THR
91
n
91
THR
91
B
GLN
92
n
92
GLN
92
B
ILE
93
n
93
ILE
93
B
GLY
94
n
94
GLY
94
B
CYS
95
n
95
CYS
95
B
THR
96
n
96
THR
96
B
LEU
97
n
97
LEU
97
B
ASN
98
n
98
ASN
98
B
PHE
99
n
99
PHE
99
B
author_and_software_defined_assembly
PISA
2
dimeric
5530
-56
9340
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
3
A
N
ILE
3
B
O
LEU
97
B
O
LEU
97
B
O
THR
96
B
O
THR
96
A
N
ASN
98
A
N
ASN
98
A
N
LEU
97
A
N
LEU
97
B
O
ILE
3
B
O
ILE
3
A
N
LYS
43
A
N
LYS
43
A
O
GLN
58
A
O
GLN
58
A
N
ILE
66
A
N
ILE
66
A
O
HIS
69
A
O
HIS
69
A
O
LEU
76
A
O
LEU
76
A
N
LEU
33
A
N
LEU
33
A
N
VAL
32
A
N
VAL
32
A
O
ILE
84
A
O
ILE
84
A
O
ILE
85
A
O
ILE
85
A
N
LEU
23
A
N
LEU
23
A
O
GLN
18
A
O
GLN
18
A
N
ILE
15
A
N
ILE
15
A
N
ARG
14
A
N
ARG
14
A
O
GLU
65
A
O
GLU
65
B
N
LYS
43
B
N
LYS
43
B
O
GLN
58
B
O
GLN
58
B
N
TYR
59
B
N
TYR
59
B
O
VAL
75
B
O
VAL
75
B
O
LEU
76
B
O
LEU
76
B
N
LEU
33
B
N
LEU
33
B
N
VAL
32
B
N
VAL
32
B
O
ILE
84
B
O
ILE
84
B
O
ILE
85
B
O
ILE
85
B
N
LEU
23
B
N
LEU
23
B
O
LYS
20
B
O
LYS
20
B
N
ILE
13
B
N
ILE
13
B
N
ARG
14
B
N
ARG
14
B
O
GLU
65
B
O
GLU
65
1
A
CG
LYS
7
A
CG
LYS
7
1
Y
1
A
CD
LYS
7
A
CD
LYS
7
1
Y
1
A
CE
LYS
7
A
CE
LYS
7
1
Y
1
A
NZ
LYS
7
A
NZ
LYS
7
1
Y
1
A
CG
LYS
41
A
CG
LYS
41
1
Y
1
A
CD
LYS
41
A
CD
LYS
41
1
Y
1
A
CE
LYS
41
A
CE
LYS
41
1
Y
1
A
NZ
LYS
41
A
NZ
LYS
41
1
Y
1
A
CG
LYS
43
A
CG
LYS
43
1
Y
1
A
CD
LYS
43
A
CD
LYS
43
1
Y
1
A
CE
LYS
43
A
CE
LYS
43
1
Y
1
A
NZ
LYS
43
A
NZ
LYS
43
1
Y
1
B
CG
LYS
41
B
CG
LYS
41
1
Y
1
B
CD
LYS
41
B
CD
LYS
41
1
Y
1
B
CE
LYS
41
B
CE
LYS
41
1
Y
1
B
NZ
LYS
41
B
NZ
LYS
41
1
Y
1
B
CG
LYS
43
B
CG
LYS
43
1
Y
1
B
CD
LYS
43
B
CD
LYS
43
1
Y
1
B
CE
LYS
43
B
CE
LYS
43
1
Y
1
B
NZ
LYS
43
B
NZ
LYS
43
1
Y
1
-3.28
0.50
120.30
117.02
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
87
87
87
N
1
A
A
CB
CG
ARG
ARG
14
14
-0.173
0.027
1.521
1.348
N
1
A
A
CD
OE2
GLU
GLU
21
21
0.083
0.011
1.252
1.335
B
B
N
1
A
A
CD
OE1
GLU
GLU
34
34
0.144
0.011
1.252
1.396
N
1
A
A
CD
OE2
GLU
GLU
35
35
0.069
0.011
1.252
1.321
N
1
A
A
CD
OE2
GLU
GLU
65
65
-0.130
0.011
1.252
1.122
N
1
A
A
CB
SG
CYS
CYS
67
67
-0.188
0.016
1.812
1.624
N
1
A
A
CB
SG
CYS
CYS
95
95
-0.139
0.016
1.812
1.673
A
A
N
1
B
B
CA
CB
THR
THR
4
4
0.248
0.026
1.529
1.777
N
1
B
B
CB
OG1
THR
THR
4
4
-0.215
0.020
1.428
1.213
N
1
B
B
NE
CZ
ARG
ARG
8
8
0.086
0.013
1.326
1.412
N
1
B
B
NE
CZ
ARG
ARG
14
14
-0.098
0.013
1.326
1.228
N
1
B
B
CA
CB
GLN
GLN
18
18
0.132
0.022
1.535
1.667
N
1
B
B
CD
CE
LYS
LYS
45
45
-0.176
0.025
1.508
1.332
N
1
B
B
CE
NZ
LYS
LYS
45
45
-0.196
0.025
1.486
1.290
N
1
B
B
CB
CG
MET
MET
46
46
0.220
0.032
1.509
1.729
B
B
N
1
B
B
CD1
CE1
TYR
TYR
59
59
-0.100
0.015
1.389
1.289
N
1
B
B
CB
SG
CYS
CYS
67
67
-0.185
0.016
1.812
1.627
N
1
A
B
O
O
GLY
HOH
16
618
1.94
1_555
1_655
15.422
-0.39
0.00
0.00
-0.06
0.00
0.45
0.976
0.965
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.179
0.1397
0.14
1.20
42.26
2775
55001
52226
5.0
95.52
0.622
0.028
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.040
0.042
0.80
0.80
1.40
1F7A
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
1.20
42.26
259
1818
63
0
1496
0.039
0.022
1664
0.007
0.020
1591
1.593
2.018
2284
0.722
3.000
3708
6.960
5.000
215
0.149
0.200
270
0.021
0.020
1822
0.028
0.020
301
0.244
0.200
285
0.274
0.200
1925
0.095
0.200
1088
0.254
0.200
172
0.310
0.200
18
0.312
0.200
101
0.338
0.200
49
3.219
1.500
1033
4.242
2.000
1690
5.811
3.000
631
8.132
4.500
593
2.590
1.000
1664
16.645
3.000
267
9.511
3.000
1628
0.264
0.204
1.232
146
2913
20
1.20
50.
1T3R
55056
55056
0
0
0.038
0.038
1
25
5.5
95.5
0.317
1.20
1.24
4320
0.317
1
76.2
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
refinement
REFMAC
5.1.19
HIV protease wild-type in complex with TMC114 inhibitor
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
3
N
N
2
N
N
2
N
N
4
N
N
4
N
N
A
GLY
86
A
GLY
86
HELX_P
A
THR
91
A
THR
91
1
1
6
B
GLY
86
B
GLY
86
HELX_P
B
THR
91
B
THR
91
1
2
6
HYDROLASE
HIV-1 PROTEASE; DRUG RESISTANCE; THERMODYNAMICS; SUBSTRATE ENVELOPE, HYDROLASE
POL_HV1A2
UNP
1
57
P03369
PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPVEICGHKAIGTVLVGPT
PVNIIGRNLLTQIGCTLNF
57
155
1T3R
1
99
P03369
A
1
1
99
57
155
1T3R
1
99
P03369
B
1
1
99
1
GLN
engineered mutation
LYS
7
1T3R
A
P03369
UNP
63
7
2
GLN
engineered mutation
LYS
7
1T3R
B
P03369
UNP
63
7
4
8
8
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
GLN
2
A
GLN
2
A
ILE
3
A
ILE
3
B
THR
96
B
THR
96
B
ASN
98
B
ASN
98
A
THR
96
A
THR
96
A
ASN
98
A
ASN
98
B
GLN
2
B
GLN
2
B
THR
4
B
THR
4
A
LYS
43
A
LYS
43
A
GLY
49
A
GLY
49
A
GLY
52
A
GLY
52
A
ILE
66
A
ILE
66
A
HIS
69
A
HIS
69
A
VAL
77
A
VAL
77
A
VAL
32
A
VAL
32
A
LEU
33
A
LEU
33
A
ILE
84
A
ILE
84
A
ILE
85
A
ILE
85
A
GLN
18
A
GLN
18
A
LEU
24
A
LEU
24
A
LEU
10
A
LEU
10
A
ILE
15
A
ILE
15
A
GLY
52
A
GLY
52
A
ILE
66
A
ILE
66
B
LYS
43
B
LYS
43
B
GLY
49
B
GLY
49
B
GLY
52
B
GLY
52
B
ILE
66
B
ILE
66
B
HIS
69
B
HIS
69
B
VAL
77
B
VAL
77
B
VAL
32
B
VAL
32
B
LEU
33
B
LEU
33
B
ILE
84
B
ILE
84
B
ILE
85
B
ILE
85
B
GLN
18
B
GLN
18
B
LEU
24
B
LEU
24
B
LEU
10
B
LEU
10
B
ILE
15
B
ILE
15
B
GLY
52
B
GLY
52
B
ILE
66
B
ILE
66
BINDING SITE FOR RESIDUE PO4 B 501
B
PO4
501
Software
10
BINDING SITE FOR RESIDUE PO4 A 502
A
PO4
502
Software
3
BINDING SITE FOR RESIDUE PO4 B 503
B
PO4
503
Software
7
BINDING SITE FOR RESIDUE PO4 A 504
A
PO4
504
Software
5
BINDING SITE FOR RESIDUE PO4 A 505
A
PO4
505
Software
6
BINDING SITE FOR RESIDUE 017 A 1200
A
017
1200
Software
19
A
ARG
14
A
ARG
14
10
1_455
A
GLY
16
A
GLY
16
10
1_455
A
GLY
17
A
GLY
17
10
1_455
A
HOH
1242
I
HOH
10
1_455
B
ARG
14
B
ARG
14
10
1_555
B
GLY
16
B
GLY
16
10
1_555
B
GLY
17
B
GLY
17
10
1_555
B
HOH
515
J
HOH
10
1_555
B
HOH
525
J
HOH
10
1_555
B
HOH
617
J
HOH
10
1_555
A
LYS
7
A
LYS
7
3
1_555
A
ARG
8
A
ARG
8
3
1_555
A
HOH
1225
I
HOH
3
1_555
A
GLY
68
A
GLY
68
7
4_456
A
HIS
69
A
HIS
69
7
4_456
A
LYS
70
A
LYS
70
7
4_456
A
HOH
1210
I
HOH
7
4_456
A
HOH
1249
I
HOH
7
4_456
B
PRO
1
B
PRO
1
7
1_555
B
LYS
55
B
LYS
55
7
2_565
A
MET
36
A
MET
36
5
1_555
A
ASN
37
A
ASN
37
5
1_555
B
PRO
39
B
PRO
39
5
1_655
B
GLY
40
B
GLY
40
5
1_655
B
HOH
621
J
HOH
5
1_655
A
LYS
20
A
LYS
20
6
1_555
A
GLU
21
A
GLU
21
6
1_555
A
ASN
83
A
ASN
83
6
1_555
A
HOH
1219
I
HOH
6
1_555
A
HOH
1226
I
HOH
6
1_555
B
HOH
616
J
HOH
6
3_655
A
ASP
25
A
ASP
25
19
1_555
A
GLY
27
A
GLY
27
19
1_555
A
ALA
28
A
ALA
28
19
1_555
A
ASP
29
A
ASP
29
19
1_555
A
ASP
30
A
ASP
30
19
1_555
A
GLY
48
A
GLY
48
19
1_555
A
GLY
49
A
GLY
49
19
1_555
A
ILE
50
A
ILE
50
19
1_555
A
HOH
1203
I
HOH
19
1_555
A
HOH
1311
I
HOH
19
1_555
B
ASP
25
B
ASP
25
19
1_555
B
GLY
27
B
GLY
27
19
1_555
B
ALA
28
B
ALA
28
19
1_555
B
ASP
30
B
ASP
30
19
1_555
B
VAL
32
B
VAL
32
19
1_555
B
GLY
48
B
GLY
48
19
1_555
B
GLY
49
B
GLY
49
19
1_555
B
VAL
82
B
VAL
82
19
1_555
B
ILE
84
B
ILE
84
19
1_555
19
P 21 21 21