1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
A BETA-BULGE STRUCTURE OCCURS AT LYS 50 - GLN 51 - LEU 52.
Kohda, D.
Hatanaka, H.
Odaka, M.
Inagaki, F.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
72
953
960
10.1016/0092-8674(93)90583-C
7681365
Solution structure of the SH3 domain of phospholipase C-gamma.
1993
UK
Structure
STRUE6
2005
0969-2126
2
1029
1040
Solution Structure and Ligand-Binding Site of the C-Terminal SH3 Domain of Grb2
1994
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
8249.244
PHOSPHOLIPASE C-GAMMA (SH3 DOMAIN)
3.1.4.11
1
man
polymer
no
no
GSPTFKCAVKALFDYKAQREDELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMVNPEGIHRD
GSPTFKCAVKALFDYKAQREDELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMVNPEGIHRD
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
sample
GRB2
9606
Homo sapiens
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conf
struct_conf_type
repository
Initial release
Version format compliance
Version format compliance
Derived calculations
Other
1
0
1994-08-31
1
1
2008-03-24
1
2
2011-07-13
1
3
2017-11-29
_pdbx_database_status.process_site
Y
BNL
1994-06-13
REL
1
NILGES
refinement
DSPACE
BRUNGER
refinement
X-PLOR
GLY
1
n
1
GLY
1
A
SER
2
n
2
SER
2
A
PRO
3
n
3
PRO
3
A
THR
4
n
4
THR
4
A
PHE
5
n
5
PHE
5
A
LYS
6
n
6
LYS
6
A
CYS
7
n
7
CYS
7
A
ALA
8
n
8
ALA
8
A
VAL
9
n
9
VAL
9
A
LYS
10
n
10
LYS
10
A
ALA
11
n
11
ALA
11
A
LEU
12
n
12
LEU
12
A
PHE
13
n
13
PHE
13
A
ASP
14
n
14
ASP
14
A
TYR
15
n
15
TYR
15
A
LYS
16
n
16
LYS
16
A
ALA
17
n
17
ALA
17
A
GLN
18
n
18
GLN
18
A
ARG
19
n
19
ARG
19
A
GLU
20
n
20
GLU
20
A
ASP
21
n
21
ASP
21
A
GLU
22
n
22
GLU
22
A
LEU
23
n
23
LEU
23
A
THR
24
n
24
THR
24
A
PHE
25
n
25
PHE
25
A
ILE
26
n
26
ILE
26
A
LYS
27
n
27
LYS
27
A
SER
28
n
28
SER
28
A
ALA
29
n
29
ALA
29
A
ILE
30
n
30
ILE
30
A
ILE
31
n
31
ILE
31
A
GLN
32
n
32
GLN
32
A
ASN
33
n
33
ASN
33
A
VAL
34
n
34
VAL
34
A
GLU
35
n
35
GLU
35
A
LYS
36
n
36
LYS
36
A
GLN
37
n
37
GLN
37
A
GLU
38
n
38
GLU
38
A
GLY
39
n
39
GLY
39
A
GLY
40
n
40
GLY
40
A
TRP
41
n
41
TRP
41
A
TRP
42
n
42
TRP
42
A
ARG
43
n
43
ARG
43
A
GLY
44
n
44
GLY
44
A
ASP
45
n
45
ASP
45
A
TYR
46
n
46
TYR
46
A
GLY
47
n
47
GLY
47
A
GLY
48
n
48
GLY
48
A
LYS
49
n
49
LYS
49
A
LYS
50
n
50
LYS
50
A
GLN
51
n
51
GLN
51
A
LEU
52
n
52
LEU
52
A
TRP
53
n
53
TRP
53
A
PHE
54
n
54
PHE
54
A
PRO
55
n
55
PRO
55
A
SER
56
n
56
SER
56
A
ASN
57
n
57
ASN
57
A
TYR
58
n
58
TYR
58
A
VAL
59
n
59
VAL
59
A
GLU
60
n
60
GLU
60
A
GLU
61
n
61
GLU
61
A
MET
62
n
62
MET
62
A
VAL
63
n
63
VAL
63
A
ASN
64
n
64
ASN
64
A
PRO
65
n
65
PRO
65
A
GLU
66
n
66
GLU
66
A
GLY
67
n
67
GLY
67
A
ILE
68
n
68
ILE
68
A
HIS
69
n
69
HIS
69
A
ARG
70
n
70
ARG
70
A
ASP
71
n
71
ASP
71
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
31
A
N
ILE
31
A
O
VAL
9
A
O
VAL
9
A
N
LYS
10
A
N
LYS
10
A
O
GLU
60
A
O
GLU
60
A
N
TYR
15
A
N
TYR
15
A
O
PHE
25
A
O
PHE
25
A
N
GLU
35
A
N
GLU
35
A
O
ARG
43
A
O
ARG
43
A
N
TYR
46
A
N
TYR
46
A
O
LYS
49
A
O
LYS
49
A
N
GLU
35
A
N
GLU
35
A
O
ARG
43
A
O
ARG
43
A
N
TRP
42
A
N
TRP
42
A
O
PHE
54
A
O
PHE
54
1
A
ARG
19
0.142
SIDE CHAIN
1
A
ARG
43
0.186
SIDE CHAIN
1
A
ARG
70
0.277
SIDE CHAIN
1
-6.05
1.00
110.10
104.05
A
A
A
CG
CD1
NE1
TRP
TRP
TRP
41
41
41
N
1
6.27
0.90
109.00
115.27
A
A
A
CD1
NE1
CE2
TRP
TRP
TRP
41
41
41
N
1
8.49
1.10
130.40
138.89
A
A
A
NE1
CE2
CZ2
TRP
TRP
TRP
41
41
41
N
1
-6.50
1.00
107.30
100.80
A
A
A
NE1
CE2
CD2
TRP
TRP
TRP
41
41
41
N
1
-7.17
1.00
110.10
102.93
A
A
A
CG
CD1
NE1
TRP
TRP
TRP
42
42
42
N
1
6.83
0.90
109.00
115.83
A
A
A
CD1
NE1
CE2
TRP
TRP
TRP
42
42
42
N
1
7.01
1.10
130.40
137.41
A
A
A
NE1
CE2
CZ2
TRP
TRP
TRP
42
42
42
N
1
-6.94
1.00
110.10
103.16
A
A
A
CG
CD1
NE1
TRP
TRP
TRP
53
53
53
N
1
6.15
0.90
109.00
115.15
A
A
A
CD1
NE1
CE2
TRP
TRP
TRP
53
53
53
N
1
9.24
1.10
130.40
139.64
A
A
A
NE1
CE2
CZ2
TRP
TRP
TRP
53
53
53
N
1
-6.60
1.00
107.30
100.70
A
A
A
NE1
CE2
CD2
TRP
TRP
TRP
53
53
53
N
1
A
A
CG
CD2
TRP
TRP
42
42
-0.107
0.017
1.432
1.325
N
1
A
A
CG
CD2
TRP
TRP
53
53
-0.105
0.017
1.432
1.327
N
1
A
A
CG
ND1
HIS
HIS
69
69
-0.102
0.015
1.369
1.267
N
1
A
SER
2
-159.76
68.20
1
A
PHE
5
-77.21
-162.09
1
A
LYS
6
53.54
167.74
1
A
ALA
11
-34.85
115.83
1
A
LYS
16
-149.31
58.68
1
A
GLN
18
71.46
-36.96
1
A
ARG
19
-173.06
76.84
1
A
GLU
20
-153.02
46.89
1
A
GLU
22
175.36
153.00
1
A
SER
28
105.16
-12.11
1
A
ASN
33
55.59
96.23
1
A
GLU
35
-179.15
106.52
1
A
LYS
36
-43.80
158.71
1
A
GLU
38
46.68
16.11
1
A
TYR
46
-169.45
45.98
1
A
GLN
51
75.56
80.14
1
A
LEU
52
-104.67
-115.06
1
A
GLU
60
-173.09
131.76
1
A
GLU
61
-59.57
74.59
1
A
MET
62
33.82
101.59
1
A
VAL
63
-73.37
27.10
1
A
PRO
65
-59.01
-145.04
1
A
GLU
66
58.60
143.89
1
A
ARG
70
-73.68
-132.77
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
PHOSPHOLIPASE C-GAMMA (SH3 DOMAIN) (E.C.3.1.4.11) (NMR, MINIMIZED MEAN STRUCTURE)
SOLUTION STRUCTURE OF THE SH3 DOMAIN OF PHOSPHOLIPASE CGAMMA
1
Y
N
A
SER
56
A
SER
56
HELX_P
3/10 HELIX
A
TYR
58
A
TYR
58
5
GH
3
PHOSPHORIC DIESTER HYDROLASE
PHOSPHORIC DIESTER HYDROLASE
PLCG1_HUMAN
UNP
1
1
P19174
MAGAASPCANGCGPGAPSDAEVLHLCRSLEVGTVMTLFYSKKSQRPERKTFQVKLETRQITWSRGADKIEGAIDIREIKE
IRPGKTSRDFDRYQEDPAFRPDQSHCFVILYGMEFRLKTLSLQATSEDEVNMWIKGLTWLMEDTLQAPTPLQIERWLRKQ
FYSVDRNREDRISAKDLKNMLSQVNYRVPNMRFLRERLTDLEQRSGDITYGQFAQLYRSLMYSAQKTMDLPFLEASTLRA
GERPELCRVSLPEFQQFLLDYQGELWAVDRLQVQEFMLSFLRDPLREIEEPYFFLDEFVTFLFSKENSVWNSQLDAVCPD
TMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPDGMPVIYHGHTLTTKIKFSDVLHTIKEH
AFVASEYPVILSIEDHCSIAQQRNMAQYFKKVLGDTLLTKPVEISADGLPSPNQLKRKILIKHKKLAEGSAYEEVPTSMM
YSENDISNSIKNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEVSSSTELHSNEKWFHGKLGAGRD
GRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFFLTDNLVFDSLYDLITHYQ
QVPLRCNEFEMRLSEPVPQTNAHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRVQQE
GQTVMLGNSEFDSLVDLISYYEKHPLYRKMKLRYPINEEALEKIGTAEPDYGALYEGRNPGFYVEANPMPTFKCAVKALF
DYKAQREDELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMVNPVALEPEREHLDENSPLGDLLRGVLDVPA
CQIAIRPEGKNNRLFVFSISMASVAHWSLDVAADSQEELQDWVKKIREVAQTADARLTEGKIMERRKKIALELSELVVYC
RPVPFDEEKIGTERACYRDMSSFPETKAEKYVNKAKGKKFLQYNRLQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNF
QTPDKPMQMNQALFMTGRHCGYVLQPSTMRDEAFDPFDKSSLRGLEPCAISIEVLGARHLPKNGRGIVCPFVEIEVAGAE
YDSTKQKTEFVVDNGLNPVWPAKPFHFQISNPEFAFLRFVVYEEDMFSDQNFLAQATFPVKGLKTGYRAVPLKNNYSEDL
ELASLLIKIDIFPAKENGDLSPFSGTSLRERGSDASGQLFHGRAREGSFESRYQQPFEDFRISQEHLADHFDSRERRAPR
RTRVNGDNRL
790
851
1HSQ
3
64
P19174
A
1
3
64
3
2
3
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ALA
29
A
ALA
29
A
GLN
32
A
GLN
32
A
CYS
7
A
CYS
7
A
ALA
11
A
ALA
11
A
VAL
59
A
VAL
59
A
MET
62
A
MET
62
A
PHE
13
A
PHE
13
A
LYS
16
A
LYS
16
A
THR
24
A
THR
24
A
ILE
26
A
ILE
26
A
VAL
34
A
VAL
34
A
LYS
36
A
LYS
36
A
TRP
41
A
TRP
41
A
TYR
46
A
TYR
46
A
LYS
49
A
LYS
49
A
LYS
50
A
LYS
50
A
VAL
34
A
VAL
34
A
LYS
36
A
LYS
36
A
TRP
41
A
TRP
41
A
TYR
46
A
TYR
46
A
LEU
52
A
LEU
52
A
PRO
55
A
PRO
55
1
P 1