POP-OUT | CLOSE
 
ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX
DOI:10.2210/pdb9ant/pdb   NDB ID: PD0007
9ANT
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription/dna
    Structure Weight: 34593.84
    Molecule: DNA (5'-D(*AP*GP*AP*AP*AP*GP*CP*CP*AP*TP*TP*AP*GP*AP*G)-3')
    Polymer: 1 Type: dna Length: 15
    Chains: C, E
    Molecule: DNA (5'-D(*TP*CP*TP*CP*TP*AP*AP*TP*GP*GP*CP*TP*TP*TP*C)-3')
    Polymer: 2 Type: dna Length: 15
    Chains: D, F
    Molecule: ANTENNAPEDIA HOMEODOMAIN
    Polymer: 3 Type: protein Length: 62
    Chains: A, B
    Fragment: HOMEODOMAIN
    Mutation: C39S
    Organism: Drosophila melanogaster
    Gene Names: Antp CG1028
    UniProtKB: Protein Feature View | Search PDB | P02833  
     
  •   Structure Validation Hide

    Download full validation report    

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Drosophila melanogaster   Taxonomy   Common Name: Fruit fly Expression System: Escherichia coli  
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    NI
    Search 
    Download 
    NI Ni
    NICKEL (II) ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: PD0007
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Fraenkel, E.,  Pabo, C.O.

    Deposition:   1998-07-02
    Release:   1998-10-14
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
    Mouse over text for details
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   2.40
    R-Value: 0.218 (obs.)
    R-Free: 0.239
    Space Group: P 2 2 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 61.05 α = 90.00 
    b = 77.75 β = 90.00 
    c = 94.42 γ = 90.00