Download MendeleyA novel accessory protein stabilizes the capsid of two actinobacteriophages
Podgorski, J.M., Podgorski, J., Gosselin, S., Abad, L., Jacobs-Sera, D., Brown, C., Hatfull, G., Gogarten, P., Luque, A., White, S.J.To be published.
8SAJ
Mycobacterium phage Adjutor
- PDB DOI: https://doi.org/10.2210/pdb8SAJ/pdb
- EM Map EMD-40271: EMDB EMDataResource
- Classification: VIRUS
- Organism(s): Mycobacterium phage Adjutor
- Mutation(s): No
- Deposited: 2023-04-01 Released: 2024-04-03
- Funding Organization(s): Not funded
Experimental Data Snapshot
- Method: ELECTRON MICROSCOPY
- Resolution: 2.66 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Major capsid protein | 403 | Mycobacterium phage Adjutor | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for B2ZNR4 (Mycobacterium phage Adjutor) Explore B2ZNR4 Go to UniProtKB: B2ZNR4 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | B2ZNR4 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| gp_16 (Minor Capsid Protein) | 139 | Mycobacterium phage Adjutor | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for B2ZNR3 (Mycobacterium phage Adjutor) Explore B2ZNR3 Go to UniProtKB: B2ZNR3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | B2ZNR3 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| HNH endonuclease | K [auth Y], L [auth Z] | 54 | Mycobacterium phage Adjutor | Mutation(s): 0 |  |
UniProt | |||||
Find proteins for B2ZNQ1 (Mycobacterium phage Adjutor) Explore B2ZNQ1 Go to UniProtKB: B2ZNQ1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | B2ZNQ1 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: ELECTRON MICROSCOPY
- Resolution: 2.66 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
| Task | Software Package | Version |
|---|---|---|
| MODEL REFINEMENT | PHENIX | 1.20.1 |
| MODEL REFINEMENT | ISOLDE | 1.3 |
| RECONSTRUCTION | RELION | 3.1.0 |
Entry History & Funding Information
Deposition Data
- Released Date: 2024-04-03 Deposition Author(s): Podgorski, J.M., White, S.J.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Not funded | -- |
Revision History (Full details and data files)
- Version 1.0: 2024-04-03
Type: Initial release
