8S9J

FphA, Staphylococcus aureus fluorophosphonate-binding serine hydrolases A, apo form

PDB DOI: https://doi.org/10.2210/pdb8S9J/pdb

Classification: HYDROLASE
Organism(s): Staphylococcus aureus USA300-CA-263
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2023-03-28 Released: 2024-04-10
Deposition Author(s): Fellner, M.
Funding Organization(s): Capability Build Funding - New Zealand Synchrotron Group Ltd

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.25 Å
R-Value Free: 0.277
R-Value Work: 0.241
R-Value Observed: 0.243

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

FphA, Staphylococcus aureus fluorophosphonate-binding serine hydrolases A, apo form

Fellner, M.

To be published.

Macromolecule Content

Total Structure Weight: 368.35 kDa
Atom Count: 26,026
Modelled Residue Count: 3,163
Deposited Residue Count: 3,171
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Fluorophosphonate-binding serine hydrolase A	A, B, C, D, E A, B, C, D, E, F, G	453	Staphylococcus aureus USA300-CA-263	Mutation(s): 0 Gene Names: pnbA, DD547_02485, EP54_14100, EQ90_00535, GO814_08475, GO942_08205, GQX37_11595, NCTC13131_01802, SAGV69_02939, SAHC1335_00445... pnbA, DD547_02485, EP54_14100, EQ90_00535, GO814_08475, GO942_08205, GQX37_11595, NCTC13131_01802, SAGV69_02939, SAHC1335_00445, SAMEA2077334_00038, SAMEA2078260_00273, SAMEA2078588_00580, SAMEA2080344_00347, SAMEA2081063_01648, SAMEA2081470_00272, SAMEA70146418_00277 EC: 3.1.1
UniProt
Find proteins for A0A0D6GYZ4 (Staphylococcus aureus) Explore A0A0D6GYZ4 Go to UniProtKB: A0A0D6GYZ4
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A0D6GYZ4
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
SO4 Query on SO4 Download Ideal Coordinates CCD File SDF format, chain AA [auth E] SDF format, chain BA [auth E] SDF format, chain CA [auth E] SDF format, chain DA [auth E] SDF format, chain EA [auth F] SDF format, chain FA [auth F] SDF format, chain GA [auth F] SDF format, chain H [auth A] SDF format, chain HA [auth G] SDF format, chain I [auth A] SDF format, chain IA [auth G] SDF format, chain J [auth A] SDF format, chain K [auth A] SDF format, chain L [auth A] SDF format, chain M [auth A] SDF format, chain N [auth B] SDF format, chain O [auth B] SDF format, chain P [auth B] SDF format, chain Q [auth B] SDF format, chain R [auth C] SDF format, chain S [auth C] SDF format, chain T [auth C] SDF format, chain U [auth C] SDF format, chain V [auth C] SDF format, chain W [auth D] SDF format, chain X [auth D] SDF format, chain Y [auth D] SDF format, chain Z [auth D] MOL2 format, chain AA [auth E] MOL2 format, chain BA [auth E] MOL2 format, chain CA [auth E] MOL2 format, chain DA [auth E] MOL2 format, chain EA [auth F] MOL2 format, chain FA [auth F] MOL2 format, chain GA [auth F] MOL2 format, chain H [auth A] MOL2 format, chain HA [auth G] MOL2 format, chain I [auth A] MOL2 format, chain IA [auth G] MOL2 format, chain J [auth A] MOL2 format, chain K [auth A] MOL2 format, chain L [auth A] MOL2 format, chain M [auth A] MOL2 format, chain N [auth B] MOL2 format, chain O [auth B] MOL2 format, chain P [auth B] MOL2 format, chain Q [auth B] MOL2 format, chain R [auth C] MOL2 format, chain S [auth C] MOL2 format, chain T [auth C] MOL2 format, chain U [auth C] MOL2 format, chain V [auth C] MOL2 format, chain W [auth D] MOL2 format, chain X [auth D] MOL2 format, chain Y [auth D] MOL2 format, chain Z [auth D]	AA [auth E] BA [auth E] CA [auth E] DA [auth E] EA [auth F] AA [auth E], BA [auth E], CA [auth E], DA [auth E], EA [auth F], FA [auth F], GA [auth F], H [auth A], HA [auth G], I [auth A], IA [auth G], J [auth A], K [auth A], L [auth A], M [auth A], N [auth B], O [auth B], P [auth B], Q [auth B], R [auth C], S [auth C], T [auth C], U [auth C], V [auth C], W [auth D], X [auth D], Y [auth D], Z [auth D]	SULFATE ION O₄ S QAOWNCQODCNURD-UHFFFAOYSA-L		Interactions Focus chain AA [auth E] Focus chain BA [auth E] Focus chain CA [auth E] Focus chain DA [auth E] Focus chain EA [auth F] Focus chain FA [auth F] Focus chain GA [auth F] Focus chain H [auth A] Focus chain HA [auth G] Focus chain I [auth A] Focus chain IA [auth G] Focus chain J [auth A] Focus chain K [auth A] Focus chain L [auth A] Focus chain M [auth A] Focus chain N [auth B] Focus chain O [auth B] Focus chain P [auth B] Focus chain Q [auth B] Focus chain R [auth C] Focus chain S [auth C] Focus chain T [auth C] Focus chain U [auth C] Focus chain V [auth C] Focus chain W [auth D] Focus chain X [auth D] Focus chain Y [auth D] Focus chain Z [auth D] Interactions & Density Focus chain AA [auth E] Focus chain BA [auth E] Focus chain CA [auth E] Focus chain DA [auth E] Focus chain EA [auth F] Focus chain FA [auth F] Focus chain GA [auth F] Focus chain H [auth A] Focus chain HA [auth G] Focus chain I [auth A] Focus chain IA [auth G] Focus chain J [auth A] Focus chain K [auth A] Focus chain L [auth A] Focus chain M [auth A] Focus chain N [auth B] Focus chain O [auth B] Focus chain P [auth B] Focus chain Q [auth B] Focus chain R [auth C] Focus chain S [auth C] Focus chain T [auth C] Focus chain U [auth C] Focus chain V [auth C] Focus chain W [auth D] Focus chain X [auth D] Focus chain Y [auth D] Focus chain Z [auth D]