Download MendeleyEntamoeba histolytica Pyruvate kinase
Rath, P.P., Gourinath, S.To be published.
8IW2
Entamoeba histolytica Pyruvate kinase
- PDB DOI: https://doi.org/10.2210/pdb8IW2/pdb
- Classification: CYTOSOLIC PROTEIN
- Organism(s): Entamoeba histolytica HM-1:IMSS
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2023-03-29 Released: 2024-04-10
- Funding Organization(s): Department of Science & Technology (DST, India)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.75 Å
- R-Value Free: 0.202
- R-Value Work: 0.171
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Pyruvate kinase | 321 | Entamoeba histolytica HM-1:IMSS | Mutation(s): 0 Gene Names: EHI_098420 EC: 2.7.1.40 |  | |
UniProt | |||||
Find proteins for C4LXC4 (Entamoeba histolytica (strain ATCC 30459 / HM-1:IMSS / ABRM)) Explore C4LXC4 Go to UniProtKB: C4LXC4 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | C4LXC4 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.75 Å
- R-Value Free: 0.202
- R-Value Work: 0.171
- Space Group: P 21 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 85.801 | α = 90 |
| b = 89.536 | β = 90 |
| c = 37.138 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| XDS | data reduction |
| XDS | data scaling |
| SHELXCD | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2024-04-10 Deposition Author(s): Rath, P.P., Gourinath, S., Kumari, P.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Department of Science & Technology (DST, India) | India | CRG/2020/000177 |
Revision History (Full details and data files)
- Version 1.0: 2024-04-10
Type: Initial release
