Download MendeleyCrystal structure of silkworm fibroinase complexed with E64 silworm
Guo, P.C., Wang, Z., Zhao, P.To be published.
8IUI
Crystal structure of silkworm fibroinase complexed with E-64
- PDB DOI: https://doi.org/10.2210/pdb8IUI/pdb
- Classification: HYDROLASE
- Organism(s): Bombyx mori
- Expression System: Komagataella pastoris
- Mutation(s): No
- Deposited: 2023-03-24 Released: 2024-04-03
- Funding Organization(s): National Natural Science Foundation of China (NSFC)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.56 Å
- R-Value Free: 0.269
- R-Value Work: 0.231
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Fibroinase | 218 | Bombyx mori | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for Q6T9Z7 (Bombyx mori) Explore Q6T9Z7 Go to UniProtKB: Q6T9Z7 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q6T9Z7 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| E64 (Subject of Investigation/LOI) Query on E64 | C [auth A], D [auth B] | N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE C15 H30 N5 O5 QPQNJAXBPHVASB-QWRGUYRKSA-O |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.56 Å
- R-Value Free: 0.269
- R-Value Work: 0.231
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 35.18 | α = 90 |
| b = 64.69 | β = 97.641 |
| c = 92.91 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| DIALS | data reduction |
| Aimless | data scaling |
| MOLREP | phasing |
Entry History & Funding Information
Deposition Data
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Natural Science Foundation of China (NSFC) | China | 31970468 |
| National Natural Science Foundation of China (NSFC) | China | 32030103 |
Revision History (Full details and data files)
- Version 1.0: 2024-04-03
Type: Initial release
