Download MendeleyCrystal Structure of VibMO1
Ying, Z., Feng, K.N.To be published.
8GSM
Crystal Structure of VibMO1
- PDB DOI: https://doi.org/10.2210/pdb8GSM/pdb
- Classification: BIOSYNTHETIC PROTEIN
- Organism(s): Boreostereum vibrans
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2022-09-06 Released: 2023-09-13
- Funding Organization(s): National Natural Science Foundation of China (NSFC)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.88 Å
- R-Value Free: 0.293
- R-Value Work: 0.234
- R-Value Observed: 0.236
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 4-hydroxybenzoate decarboxylase | A [auth G], B [auth H], C [auth I], D [auth J] | 465 | Boreostereum vibrans | Mutation(s): 0 Gene Names: MO1 |  |
UniProt | |||||
Find proteins for A0A167KUL3 (Boreostereum vibrans) Explore A0A167KUL3 Go to UniProtKB: A0A167KUL3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A167KUL3 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| FAD Query on FAD | E [auth G], F [auth I] | FLAVIN-ADENINE DINUCLEOTIDE C27 H33 N9 O15 P2 VWWQXMAJTJZDQX-UYBVJOGSSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.88 Å
- R-Value Free: 0.293
- R-Value Work: 0.234
- R-Value Observed: 0.236
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 120.43 | α = 90 |
| b = 127.78 | β = 90 |
| c = 146.45 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2023-09-13 Deposition Author(s): Ying, Z., Feng, K.N.
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Natural Science Foundation of China (NSFC) | China | -- |
Revision History (Full details and data files)
- Version 1.0: 2023-09-13
Type: Initial release
