Download MendeleyStructural Insight into ZFAND1 and p97 Interaction
Lai, C.H., Ko, K.T., Fan, P.J., Yu, T.A., Chang, C.F., Draczkowski, P., Hsu, S.T.D.To be published.
7Y39
Ubiquitin-like domain of human ZFAND1
- PDB DOI: https://doi.org/10.2210/pdb7Y39/pdb
- Classification: PROTEIN BINDING
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2022-06-10 Released: 2022-08-10
- Funding Organization(s): Ministry of Science and Technology (MoST, Taiwan)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.88 Å
- R-Value Free: 0.229
- R-Value Work: 0.205
- R-Value Observed: 0.207
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| AN1-type zinc finger protein 1 | 139 | Homo sapiens | Mutation(s): 0 Gene Names: ZFAND1 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q8TCF1 (Homo sapiens) Explore Q8TCF1 Go to UniProtKB: Q8TCF1 | |||||
PHAROS: Q8TCF1 GTEx: ENSG00000104231 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8TCF1 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.88 Å
- R-Value Free: 0.229
- R-Value Work: 0.205
- R-Value Observed: 0.207
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 49.158 | α = 90 |
| b = 34.284 | β = 91.97 |
| c = 64.522 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| HKL-2000 | data collection |
| HKL-2000 | data scaling |
| PHASER | phasing |
| PDB_EXTRACT | data extraction |
Entry History & Funding Information
Deposition Data
- Released Date: 2022-08-10 Deposition Author(s): Lai, C.H., Ko, K.T., Fan, P.J., Yu, T.A., Chang, C.F., Draczkowski, P., Hsu, S.T.D.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Ministry of Science and Technology (MoST, Taiwan) | Taiwan | 110-2113-M-001-050-MY3 |
| Ministry of Science and Technology (MoST, Taiwan) | Taiwan | 110-2811-M-001-583- |
| Ministry of Science and Technology (MoST, Taiwan) | Taiwan | 110-2311-B-001-013-MY3 |
Revision History (Full details and data files)
- Version 1.0: 2022-08-10
Type: Initial release - Version 1.1: 2024-04-03
Changes: Data collection, Refinement description
