Download MendeleyIntramolecular ester bond-containing repeat domain from E. columbae adhesin (split and religated)
Wardega, J.K., Squire, C.J., Young, P.G.To be published.
7UI8
Intramolecular ester bond-containing repeat domain from E. columbae adhesin (split and religated)
- PDB DOI: https://doi.org/10.2210/pdb7UI8/pdb
- Classification: CELL ADHESION
- Organism(s): Enterococcus columbae
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2022-03-28 Released: 2023-04-05
- Funding Organization(s): Not funded
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.37 Å
- R-Value Free: 0.261
- R-Value Work: 0.226
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Split ester bond-containing adhesin repeat domain | 128 | Enterococcus columbae | Mutation(s): 0 Gene Names: I568_02374 |  | |
UniProt | |||||
Find proteins for S1N325 (Enterococcus columbae DSM 7374 = ATCC 51263) Explore S1N325 Go to UniProtKB: S1N325 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | S1N325 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| GLY-ASP-THR-LYS-HIS-GLU-VAL-ARG-HIS-GLU-ASN-PRO-GLN-ASP-GLU-ALA-GLN-THR-ILE-VAL-VAL-ASN-LYS | 23 | Enterococcus columbae | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for S1N325 (Enterococcus columbae DSM 7374 = ATCC 51263) Explore S1N325 Go to UniProtKB: S1N325 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | S1N325 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.37 Å
- R-Value Free: 0.261
- R-Value Work: 0.226
- Space Group: P 6 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 120.775 | α = 90 |
| b = 120.775 | β = 90 |
| c = 45.444 | γ = 120 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| XDS | data reduction |
| Aimless | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2023-04-05 Deposition Author(s): Wardega, J.K., Squire, C.J., Young, P.G.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Not funded | -- |
Revision History (Full details and data files)
- Version 1.0: 2023-04-05
Type: Initial release - Version 1.1: 2023-10-25
Changes: Data collection, Refinement description
