7TJQ

SAN27-14 bound to a antigenic site V on prefusion-stabilized hMPV F


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.13 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Characterization of prefusion-F-specific antibodies elicited by natural infection with human metapneumovirus.

Rush, S.A.Brar, G.Hsieh, C.L.Chautard, E.Rainho-Tomko, J.N.Slade, C.D.Bricault, C.A.Kume, A.Kearns, J.Groppo, R.Mundle, S.T.Zhang, L.Casimiro, D.Fu, T.M.DiNapoli, J.M.McLellan, J.S.

(2022) Cell Rep 40: 111399-111399

  • DOI: https://doi.org/10.1016/j.celrep.2022.111399
  • Primary Citation of Related Structures:  
    7TJQ, 7TL0

  • PubMed Abstract: 

    Human metapneumovirus (hMPV) is a major cause of acute respiratory infections in infants and older adults, for which no vaccines or therapeutics are available. The viral fusion (F) glycoprotein is required for entry and is the primary target of neutralizing antibodies; however, little is known about the humoral immune response generated from natural infection. Here, using prefusion-stabilized F proteins to interrogate memory B cells from two older adults, we obtain over 700 paired non-IgM antibody sequences representing 563 clonotypes, indicative of a highly polyclonal response. Characterization of 136 monoclonal antibodies reveals broad recognition of the protein surface, with potently neutralizing antibodies targeting each antigenic site. Cryo-EM studies further reveal two non-canonical sites and the molecular basis for recognition of the apex of hMPV F by two prefusion-specific neutralizing antibodies. Collectively, these results provide insight into the humoral response to hMPV infection in older adults and will help guide vaccine development.


  • Organizational Affiliation

    Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX 78712, USA.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
SAN27-14 Fab heavy chain
A, D, H
124Homo sapiensMutation(s): 0 
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
SAN27-14 Fab light chain
B, E, L
115Homo sapiensMutation(s): 0 
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  • Reference Sequence
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Fusion glycoprotein F0
C, F, G
551human metapneumovirusMutation(s): 14 
UniProt
Find proteins for Q8B9P0 (Human metapneumovirus)
Explore Q8B9P0 
Go to UniProtKB:  Q8B9P0
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UniProt GroupQ8B9P0
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
MPE8 Fab heavy chain
I, J, N
230Homo sapiensMutation(s): 0 
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
MPE8 Fab light chain
K, M, O
214Homo sapiensMutation(s): 0 
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  • Reference Sequence
Oligosaccharides

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Entity ID: 6
MoleculeChains Length2D Diagram Glycosylation3D Interactions
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
P, Q, R, S, T
P, Q, R, S, T, U
2N/AN-Glycosylation
Glycosylation Resources
GlyTouCan:  G42666HT
GlyCosmos:  G42666HT
GlyGen:  G42666HT
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.13 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Welch FoundationUnited StatesF-0003-19620604

Revision History  (Full details and data files)

  • Version 1.0: 2022-09-14
    Type: Initial release
  • Version 1.1: 2022-11-23
    Changes: Database references