Download Mendeleyclass A beta-lactamase from Micromonospora aurantiaca ATCC 27029
Chang, C., Tesar, C., Endres, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)To be published.
6WIP
Class A beta-lactamase from Micromonospora aurantiaca ATCC 27029
- PDB DOI: https://doi.org/10.2210/pdb6WIP/pdb
- Classification: HYDROLASE
- Organism(s): Micromonospora aurantiaca ATCC 27029
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2020-04-10 Released: 2020-04-22
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.40 Å
- R-Value Free: 0.163
- R-Value Work: 0.140
- R-Value Observed: 0.141
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Beta-lactamase | 291 | Micromonospora aurantiaca ATCC 27029 | Mutation(s): 0 Gene Names: Micau_2858 EC: 3.5.2.6 |  | |
UniProt | |||||
Find proteins for D9TA79 (Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / BCRC 12538 / CBS 129.76 / JCM 10878 / NBRC 16125 / NRRL B-16091 / INA 9442)) Explore D9TA79 Go to UniProtKB: D9TA79 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | D9TA79 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | D [auth A], E [auth A], F [auth A], G [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| ACT Query on ACT | B [auth A], C [auth A] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.40 Å
- R-Value Free: 0.163
- R-Value Work: 0.140
- R-Value Observed: 0.141
- Space Group: P 21 21 21
- Diffraction Data: https://doi.org/10.18430/m36wip
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 43.115 | α = 90 |
| b = 71.953 | β = 90 |
| c = 100.684 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| SCALEPACK | data scaling |
| SBC-Collect | data collection |
| PDB_EXTRACT | data extraction |
| HKL-2000 | data reduction |
| HKL-3000 | phasing |
Entry History
Deposition Data
- Released Date: 2020-04-22 Deposition Author(s): Chang, C., Tesar, C., Endres, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
Revision History (Full details and data files)
- Version 1.0: 2020-04-22
Type: Initial release
