Download MendeleyCrystal structure of receiver domain from cyclic-di-GMP controlled hybrid histidine kinase
Dubey, B.N., Bruederlin, M., Boehm, R., Jenal, U., Hiller, S., Schirmer, T.To be published.
6TNE
Crystal structure of receiver domain from Hybrid Histidine Kinase CckA
- PDB DOI: https://doi.org/10.2210/pdb6TNE/pdb
- Classification: TRANSFERASE
- Organism(s): Caulobacter vibrioides
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2019-12-06 Released: 2020-12-16
- Funding Organization(s): Swiss National Science Foundation
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.25 Å
- R-Value Free: 0.188
- R-Value Work: 0.165
- R-Value Observed: 0.166
wwPDB Validation 3D Report Full Report
This is version 2.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Histidine kinase | 120 | Caulobacter vibrioides | Mutation(s): 0 Gene Names: cckA EC: 2.7.13.3 |  | |
UniProt | |||||
Find proteins for Q9X688 (Caulobacter vibrioides) Explore Q9X688 Go to UniProtKB: Q9X688 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9X688 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.25 Å
- R-Value Free: 0.188
- R-Value Work: 0.165
- R-Value Observed: 0.166
- Space Group: I 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 37.43 | α = 90 |
| b = 42.9 | β = 94.36 |
| c = 65.037 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| MOSFLM | data reduction |
| Aimless | data scaling |
| MOLREP | phasing |
| PDB_EXTRACT | data extraction |
Entry History & Funding Information
Deposition Data
- Released Date: 2020-12-16 Deposition Author(s): Dubey, B.N., Bruederlin, M., Schirmer, T.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Swiss National Science Foundation | Switzerland | 31003A-166652 |
Revision History (Full details and data files)
- Version 1.0: 2020-12-16
Type: Initial release - Version 2.0: 2022-10-05
Type: Coordinate replacement
Reason: Model completeness
Changes: Advisory, Atomic model, Data collection, Database references, Derived calculations, Non-polymer description, Other, Polymer sequence, Refinement description, Source and taxonomy, Structure summary
