6TC0

Crystal structure of MMS19-CIAO1-CIAO2B CIA targeting complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.60 Å
  • R-Value Free: 0.277 
  • R-Value Work: 0.258 
  • R-Value Observed: 0.259 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Structural insights into Fe-S protein biogenesis by the CIA targeting complex.

Kassube, S.A.Thoma, N.H.

(2020) Nat Struct Mol Biol 27: 735-742

  • DOI: https://doi.org/10.1038/s41594-020-0454-0
  • Primary Citation of Related Structures:  
    6TBL, 6TBN, 6TC0

  • PubMed Abstract: 

    The cytosolic iron-sulfur (Fe-S) assembly (CIA) pathway is required for the insertion of Fe-S clusters into cytosolic and nuclear client proteins, including many DNA replication and repair factors. The molecular mechanisms of client protein recognition and Fe-S cluster transfer remain unknown. Here, we report crystal structures of the CIA targeting complex (CTC), revealing that its CIAO2B subunit is centrally located and bridges CIAO1 and the client adaptor protein MMS19. Cryo-EM reconstructions of human CTC bound either to the DNA replication factor primase or to the DNA helicase DNA2, combined with biochemical, biophysical and yeast complementation assays, reveal an evolutionarily conserved, bipartite client recognition mode facilitated by CIAO1 and the structural flexibility of the MMS19 subunit. Unexpectedly, the primase Fe-S cluster is located ~70 Å away from the CTC reactive cysteine, implicating conformational dynamics of the CTC or additional maturation factors in the mechanism of Fe-S cluster transfer.


  • Organizational Affiliation

    Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Probable cytosolic iron-sulfur protein assembly protein Ciao1
A, D
338Drosophila melanogasterMutation(s): 0 
Gene Names: Ciao1CG12797
UniProt
Find proteins for Q7K1Y4 (Drosophila melanogaster)
Explore Q7K1Y4 
Go to UniProtKB:  Q7K1Y4
Entity Groups  
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UniProt GroupQ7K1Y4
Sequence Annotations
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  • Reference Sequence
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
MIP18 family protein galla-2
B, E
159Drosophila melanogasterMutation(s): 0 
Gene Names: galla-2CG7949
UniProt
Find proteins for Q9VTC4 (Drosophila melanogaster)
Explore Q9VTC4 
Go to UniProtKB:  Q9VTC4
Entity Groups  
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UniProt GroupQ9VTC4
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  • Reference Sequence
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
MMS19 nucleotide excision repair protein homolog
C, F
1,035Mus musculusMutation(s): 0 
Gene Names: Mms19Mms19l
UniProt
Find proteins for Q9D071 (Mus musculus)
Explore Q9D071 
Go to UniProtKB:  Q9D071
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9D071
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.60 Å
  • R-Value Free: 0.277 
  • R-Value Work: 0.258 
  • R-Value Observed: 0.259 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 107.4α = 90
b = 140.7β = 90
c = 327.33γ = 90
Software Package:
Software NamePurpose
CNSrefinement
PHENIXrefinement
XDSdata reduction
XDSdata scaling
SHARPphasing
SHELXDphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
European Molecular Biology Organization (EMBO)SwitzerlandALTF 871-2014
Swiss National Science FoundationSwitzerlandCRSII3_160734
European Research Council (ERC)Switzerland666068

Revision History  (Full details and data files)

  • Version 1.0: 2020-07-29
    Type: Initial release
  • Version 1.1: 2021-02-10
    Changes: Database references