Download MendeleyCrystal structure of PprA filament from Deinococcus peraridilitoris
Szabla, R., Czerwinski, M., Junop, M.S.To be published.
6O5L
Crystal structure of PprA filament from Deinococcus peraridilitoris
- PDB DOI: https://doi.org/10.2210/pdb6O5L/pdb
- Classification: DNA BINDING PROTEIN
- Organism(s): Deinococcus peraridilitoris DSM 19664
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2019-03-04 Released: 2019-03-13
- Funding Organization(s): Natural Sciences and Engineering Research Council (NSERC, Canada)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.30 Å
- R-Value Free: 0.299
- R-Value Work: 0.247
- R-Value Observed: 0.249
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| PprA | 306 | Deinococcus peraridilitoris DSM 19664 | Mutation(s): 2 Gene Names: Deipe_2275 |  | |
UniProt | |||||
Find proteins for L0A1P5 (Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200)) Explore L0A1P5 Go to UniProtKB: L0A1P5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | L0A1P5 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.30 Å
- R-Value Free: 0.299
- R-Value Work: 0.247
- R-Value Observed: 0.249
- Space Group: P 64 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 79.468 | α = 90 |
| b = 79.468 | β = 90 |
| c = 262.804 | γ = 120 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| iMOSFLM | data reduction |
| PHASER | phasing |
| PHENIX | refinement |
| Aimless | data scaling |
Entry History & Funding Information
Deposition Data
- Released Date: 2019-03-13 Deposition Author(s): Szabla, R., Junop, M.S., Rok, M.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Natural Sciences and Engineering Research Council (NSERC, Canada) | Canada | 2008R00075 |
Revision History (Full details and data files)
- Version 1.0: 2019-03-13
Type: Initial release - Version 1.1: 2020-01-08
Changes: Author supporting evidence - Version 1.2: 2023-10-11
Changes: Data collection, Database references, Refinement description - Version 1.3: 2023-11-15
Changes: Data collection
