Download MendeleyCrystal structure of the competence-damaged protein (CinA) superfamily protein from Streptococcus mutans
Stogios, P.J.To be published.
6MR3
Crystal structure of the competence-damaged protein (CinA) superfamily protein from Streptococcus mutans
- PDB DOI: https://doi.org/10.2210/pdb6MR3/pdb
- Classification: STRUCTURAL GENOMICS
- Organism(s): Streptococcus mutans UA159
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2018-10-11 Released: 2018-10-24
- Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.05 Å
- R-Value Free: 0.215
- R-Value Work: 0.186
- R-Value Observed: 0.187
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Putative competence-damage inducible protein | 418 | Streptococcus mutans UA159 | Mutation(s): 0 Gene Names: cinA, SMU_2086 |  | |
UniProt | |||||
Find proteins for Q8DRX2 (Streptococcus mutans serotype c (strain ATCC 700610 / UA159)) Explore Q8DRX2 Go to UniProtKB: Q8DRX2 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8DRX2 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CL Query on CL | D [auth A], E [auth A], F [auth B], G [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.05 Å
- R-Value Free: 0.215
- R-Value Work: 0.186
- R-Value Observed: 0.187
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 152.03 | α = 90 |
| b = 54.507 | β = 125.38 |
| c = 111.013 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| PHENIX | phasing |
| PHENIX | model building |
| DM | model building |
Entry History & Funding Information
Deposition Data
- Released Date: 2018-10-24 Deposition Author(s): Stogios, P.J., Cuff, M., Xu, X., Cui, H., Di Leo, R., Yim, V., Chin, S., Savchenko, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | GM094585 |
Revision History (Full details and data files)
- Version 1.0: 2018-10-24
Type: Initial release - Version 1.1: 2019-04-17
Changes: Data collection, Structure summary - Version 1.2: 2020-01-01
Changes: Author supporting evidence - Version 1.3: 2020-05-13
Changes: Structure summary
