Download MendeleyCrystal structure of PprA from Deinococcus radiodurans
Szabla, R., Czerwinski, M., Junop, M.S.To be published.
6MC8
Crystal structure of PprA dimer from Deinococcus deserti
- PDB DOI: https://doi.org/10.2210/pdb6MC8/pdb
- Classification: DNA BINDING PROTEIN
- Organism(s): Deinococcus deserti VCD115
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2018-08-30 Released: 2018-09-19
- Funding Organization(s): Natural Sciences and Engineering Research Council (NSERC, Canada)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.50 Å
- R-Value Free: 0.261
- R-Value Work: 0.247
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| DNA repair protein PprA | 308 | Deinococcus deserti VCD115 | Mutation(s): 2 Gene Names: pprA, Deide_2p01380 |  | |
UniProt | |||||
Find proteins for C1D318 (Deinococcus deserti (strain DSM 17065 / CIP 109153 / LMG 22923 / VCD115)) Explore C1D318 Go to UniProtKB: C1D318 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | C1D318 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.50 Å
- R-Value Free: 0.261
- R-Value Work: 0.247
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 54.417 | α = 90 |
| b = 80.985 | β = 90 |
| c = 148.868 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| CrysalisPro | data reduction |
| StructureStudio | data collection |
| PHASER | phasing |
| Aimless | data scaling |
Entry History & Funding Information
Deposition Data
- Released Date: 2018-09-19 Deposition Author(s): Szabla, R., Junop, M.S., Rok, M.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Natural Sciences and Engineering Research Council (NSERC, Canada) | Canada | 2008R00075 |
Revision History (Full details and data files)
- Version 1.0: 2018-09-19
Type: Initial release - Version 1.1: 2019-02-20
Changes: Author supporting evidence, Data collection - Version 1.2: 2020-01-08
Changes: Author supporting evidence - Version 1.3: 2024-03-13
Changes: Data collection, Database references
