Download MendeleyStructure of a triple-helix region of human collagen type II.
Yang, X., Zhu, Y., Ye, S., Zhang, R., Lu, L.To be published.
6JKL
Structure of a triple-helix region of human collagen type II
- PDB DOI: https://doi.org/10.2210/pdb6JKL/pdb
- Classification: STRUCTURAL PROTEIN
- Organism(s): Homo sapiens
- Mutation(s): No
- Deposited: 2019-03-01 Released: 2020-03-04
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.15 Å
- R-Value Free: 0.242
- R-Value Work: 0.196
- R-Value Observed: 0.198
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| A triple-helix region of human collagen type II | 29 | Homo sapiens | Mutation(s): 0 |  | |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| HYP Query on HYP | A, B, C | L-PEPTIDE LINKING | C5 H9 N O3 |  | PRO |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.15 Å
- R-Value Free: 0.242
- R-Value Work: 0.196
- R-Value Observed: 0.198
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 60.541 | α = 90 |
| b = 17.424 | β = 114.39 |
| c = 51.637 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| PHASER | phasing |
Entry History
Revision History (Full details and data files)
- Version 1.0: 2020-03-04
Type: Initial release
