6IQW

Cryo-EM structure of Csm effector complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.35 Å
  • Aggregation State: 3D ARRAY 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Cryo-EM structure of Type III-A CRISPR effector complex.

Huo, Y.Li, T.Wang, N.Dong, Q.Wang, X.Jiang, T.

(2018) Cell Res 28: 1195-1197


Macromolecules

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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Csm1777Thermococcus onnurineus NA1Mutation(s): 0 
Gene Names: TON_0893
UniProt
Find proteins for B6YWB8 (Thermococcus onnurineus (strain NA1))
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Go to UniProtKB:  B6YWB8
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UniProt GroupB6YWB8
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Csm2196Thermococcus onnurineus NA1Mutation(s): 0 
Gene Names: TON_0894
UniProt
Find proteins for B6YWB9 (Thermococcus onnurineus (strain NA1))
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Go to UniProtKB:  B6YWB9
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UniProt GroupB6YWB9
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Csm3
C, D
290Thermococcus onnurineus NA1Mutation(s): 0 
Gene Names: TON_0895
UniProt
Find proteins for B6YWC0 (Thermococcus onnurineus (strain NA1))
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UniProt GroupB6YWC0
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Csm4289Thermococcus onnurineus NA1Mutation(s): 0 
Gene Names: TON_0896
UniProt
Find proteins for B6YWC1 (Thermococcus onnurineus (strain NA1))
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UniProt GroupB6YWC1
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Csm5397Thermococcus onnurineus NA1Mutation(s): 0 
Gene Names: TON_0897
UniProt
Find proteins for B6YWC2 (Thermococcus onnurineus (strain NA1))
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UniProt GroupB6YWC2
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  • Reference Sequence

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Entity ID: 6
MoleculeChains LengthOrganismImage
RNA (5'-R(*GP*UP*GP*GP*AP*AP*AP*GP*UP*GP*GP*CP*CP*CP*GP*AP*AP*AP*CP*CP*CP*UP*UP*C)-3')G [auth I]24Thermococcus onnurineus NA1
Sequence Annotations
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Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
ATP
Query on ATP

Download Ideal Coordinates CCD File 
H [auth A]ADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.35 Å
  • Aggregation State: 3D ARRAY 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Chinese Academy of SciencesChinaXDB08010301
National Science Foundation (China)China31670750

Revision History  (Full details and data files)

  • Version 1.0: 2019-01-16
    Type: Initial release
  • Version 1.1: 2019-11-06
    Changes: Data collection, Other