6IM4

Structural basis of AimP signaling molecule recognition by AimR in Spbeta group of bacteriophages

PDB DOI: https://doi.org/10.2210/pdb6IM4/pdb

Classification: PEPTIDE BINDING PROTEIN
Organism(s): Spbetavirus SPbeta, synthetic construct
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2018-10-22 Released: 2019-01-23
Deposition Author(s): Ouyang, S.Y.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.93 Å
R-Value Free: 0.268
R-Value Work: 0.219
R-Value Observed: 0.221

wwPDB Validation 3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

Structural basis of AimP signaling molecule recognition by AimR in Spbeta group of bacteriophages.

Zhen, X., Zhou, H., Ding, W., Zhou, B., Xu, X., Perculija, V., Chen, C.J., Chang, M.X., Choudhary, M.I., Ouyang, S.

(2019) Protein Cell 10: 131-136

PubMed: 30421358 Search on PubMedSearch on PubMed Central
DOI: https://doi.org/10.1007/s13238-018-0588-6
Primary Citation of Related Structures:
6IM4, 6IPX

Organizational Affiliation

The Key Laboratory of Innate Immune Biology of Fujian Province, Biomedical Research Center of South China, College of Life Sciences, Fujian Normal University, Fuzhou, 350117, China.

Macromolecule Content

Total Structure Weight: 92.88 kDa
Atom Count: 6,824
Modelled Residue Count: 792
Deposited Residue Count: 792
Unique protein chains: 2

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
AimR transcriptional regulator	A, B	390	Spbetavirus SPbeta	Mutation(s): 0 Gene Names: aimR, yopK
UniProt
Find proteins for O64094 (Bacillus phage SPbeta) Explore O64094 Go to UniProtKB: O64094
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	O64094
Sequence Annotations Expand
Reference Sequence

Find similar proteins by: Sequence | 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
GLY-MET-PRO-ARG-GLY-ALA	C, D	6	synthetic construct	Mutation(s): 0
Sequence Annotations Expand
Reference Sequence