Download MendeleyCrystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
Choi, M.Y., Kang, L.W., Ho, T.H., Nguyen, D.Q., Lee, I.H., Lee, J.H., Park, Y.S., Park, H.J.To be published.
6ILB
Native crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
- PDB DOI: https://doi.org/10.2210/pdb6ILB/pdb
- Classification: ISOMERASE
- Organism(s): Cohnella laeviribosi
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2018-10-17 Released: 2019-10-23
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.51 Å
- R-Value Free: 0.259
- R-Value Work: 0.189
- R-Value Observed: 0.192
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Fructuronate-tagaturonate epimerase UxaE | A, B [auth D] | 489 | Cohnella laeviribosi | Mutation(s): 0 EC: 5.1.2.7 |  |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EDO Query on EDO | D [auth A], F [auth D] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
| MN Query on MN | C [auth A], E [auth D] | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| SEP Query on SEP | A, B [auth D] | L-PEPTIDE LINKING | C3 H8 N O6 P |  | SER |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.51 Å
- R-Value Free: 0.259
- R-Value Work: 0.189
- R-Value Observed: 0.192
- Space Group: P 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 51.816 | α = 98.14 |
| b = 73.47 | β = 110.16 |
| c = 74.673 | γ = 90.12 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-2000 | data scaling |
| HKL-2000 | data collection |
| HKL-2000 | data reduction |
| MOLREP | phasing |
Entry History
Deposition Data
- Released Date: 2019-10-23 Deposition Author(s): Choi, M.Y., Kang, L.W., Ho, T.H., Nguyen, D.Q., Lee, I.H., Lee, J.H., Park, Y.S., Park, H.J.
Revision History (Full details and data files)
- Version 1.0: 2019-10-23
Type: Initial release
