Download MendeleyCrystal structure of a dihydrofolate reductase from Mycobacterium smegmatis in complex with NADP and P218
Edwards, T.E., Abendroth, J., Lorimer, D.D., Horanyi, P.S., Seattle Structural Genomics Center for Infectious DiseaseTo be published.
6CXM
Crystal structure of a dihydrofolate reductase from Mycobacterium smegmatis in complex with NADP and P218
- PDB DOI: https://doi.org/10.2210/pdb6CXM/pdb
- Classification: OXIDOREDUCTASE/INHIBITOR
- Organism(s): Mycolicibacterium smegmatis MC2 155
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2018-04-03 Released: 2018-04-11
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.65 Å
- R-Value Free: 0.253
- R-Value Work: 0.197
- R-Value Observed: 0.203
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Dihydrofolate reductase | 164 | Mycolicibacterium smegmatis MC2 155 | Mutation(s): 0 Gene Names: folA, MSMEI_2607 EC: 1.5.1.3 |  | |
UniProt | |||||
Find proteins for I7FC10 (Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)) Explore I7FC10 Go to UniProtKB: I7FC10 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | I7FC10 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAP Query on NAP | C [auth A], E [auth B] | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE C21 H28 N7 O17 P3 XJLXINKUBYWONI-NNYOXOHSSA-N |  | ||
| MMV Query on MMV | D [auth A], F [auth B] | 3-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)propanoic acid C18 H24 N4 O4 VDGXZSSDCDPCRF-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.65 Å
- R-Value Free: 0.253
- R-Value Work: 0.197
- R-Value Observed: 0.203
- Space Group: P 1 21 1
- Diffraction Data: https://doi.org/10.18430/M36CXM
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 63.25 | α = 90 |
| b = 40.3 | β = 93.86 |
| c = 67.22 | γ = 90 |
| Software Name | Purpose |
|---|---|
| XDS | data reduction |
| XSCALE | data scaling |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| MOLREP | phasing |
Entry History
Deposition Data
- Released Date: 2018-04-11 Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Revision History (Full details and data files)
- Version 1.0: 2018-04-11
Type: Initial release - Version 1.1: 2023-10-04
Changes: Data collection, Database references, Refinement description
