Download MendeleyUDP-N-acetylmuramate--alanine ligase from Acinetobacter baumannii AB5075-UW with AMPPNP
Horanyi, P.S., Abendroth, J., Lorimer, D.D., Edwards, T.E.To be published.
6CAU
UDP-N-acetylmuramate--alanine ligase from Acinetobacter baumannii AB5075-UW with AMPPNP
- PDB DOI: https://doi.org/10.2210/pdb6CAU/pdb
- Classification: LIGASE
- Organism(s): Acinetobacter baumannii
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2018-01-31 Released: 2018-03-07
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.50 Å
- R-Value Free: 0.196
- R-Value Work: 0.167
- R-Value Observed: 0.170
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| UDP-N-acetylmuramate--L-alanine ligase | 472 | Acinetobacter baumannii | Mutation(s): 0 Gene Names: murC, ABBFA_000146 EC: 6.3.2.8 |  | |
UniProt | |||||
Find proteins for B7GV74 (Acinetobacter baumannii (strain AB307-0294)) Explore B7GV74 Go to UniProtKB: B7GV74 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | B7GV74 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ANP Query on ANP | B [auth A] | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER C10 H17 N6 O12 P3 PVKSNHVPLWYQGJ-KQYNXXCUSA-N |  | ||
| MG Query on MG | C [auth A], D [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.50 Å
- R-Value Free: 0.196
- R-Value Work: 0.167
- R-Value Observed: 0.170
- Space Group: P 41 21 2
- Diffraction Data: https://doi.org/10.18430/M36CAU
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 82.18 | α = 90 |
| b = 82.18 | β = 90 |
| c = 154.9 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| XSCALE | data scaling |
| MoRDa | phasing |
Entry History
Deposition Data
- Released Date: 2018-03-07 Deposition Author(s): Horanyi, P.S., Abendroth, J., Lorimer, D.D., Edwards, T.E., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Revision History (Full details and data files)
- Version 1.0: 2018-03-07
Type: Initial release - Version 1.1: 2024-03-13
Changes: Data collection, Database references, Derived calculations
