6AHZ

The NMR Structure of the Polysialyltranseferase Domain (PSTD) in Polysialyltransferase ST8siaIV


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

The Inhibition of Polysialyltranseferase ST8SiaIV Through Heparin Binding to Polysialyltransferase Domain (PSTD).

Peng, L.X.Liu, X.H.Lu, B.Liao, S.M.Zhou, F.Huang, J.M.Chen, D.Troy II, F.A.Zhou, G.P.Huang, R.B.

(2019) Med Chem 15: 486-495

  • DOI: https://doi.org/10.2174/1573406415666181218101623
  • Primary Citation of Related Structures:  
    6AHZ

  • PubMed Abstract: 

    The polysialic acid (polySia) is a unique carbohydrate polymer produced on the surface Of Neuronal Cell Adhesion Molecule (NCAM) in a number of cancer cells, and strongly correlates with the migration and invasion of tumor cells and with aggressive, metastatic disease and poor clinical prognosis in the clinic. Its synthesis is catalyzed by two polysialyltransferases (polySTs), ST8SiaIV (PST) and ST8SiaII (STX). Selective inhibition of polySTs, therefore, presents a therapeutic opportunity to inhibit tumor invasion and metastasis due to NCAM polysialylation. Heparin has been found to be effective in inhibiting the ST8Sia IV activity, but no clear molecular rationale. It has been found that polysialyltransferase domain (PSTD) in polyST plays a significant role in influencing polyST activity, and thus it is critical for NCAM polysialylation based on the previous studies.


  • Organizational Affiliation

    Life Science and Technology College, Guangxi University, Nanning, Guangxi, 530004 China; 2Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase35Homo sapiensMutation(s): 0 
EC: 2.4.99
UniProt & NIH Common Fund Data Resources
Find proteins for Q92187 (Homo sapiens)
Explore Q92187 
Go to UniProtKB:  Q92187
PHAROS:  Q92187
GTEx:  ENSG00000113532 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ92187
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of ChinaChina31570061
National Natural Science Foundation of ChinaChina31560251

Revision History  (Full details and data files)

  • Version 1.0: 2018-10-24
    Type: Initial release
  • Version 1.1: 2020-05-06
    Changes: Data collection, Database references
  • Version 1.2: 2023-06-14
    Changes: Database references, Other