6BQY

Crystal Structure of Tyrosine-tRNA Synthetase from Acinetobacter baumannii


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.188 
  • R-Value Observed: 0.190 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Crystal Structure of Glutamate-tRNA Synthetase from Helicobacter pylori

Dranow, D.M.Horanyi, P.S.Lorimer, D.D.Edwards, T.E.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Tyrosine--tRNA ligase
A, B
408Acinetobacter baumanniiMutation(s): 0 
Gene Names: 
EC: 6.1.1.1
UniProt
Find proteins for B0VML7 (Acinetobacter baumannii (strain SDF))
Explore B0VML7 
Go to UniProtKB:  B0VML7
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupB0VML7
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.188 
  • R-Value Observed: 0.190 
  • Space Group: P 1
  • Diffraction Data: https://doi.org/10.18430/M36BQY
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 53.37α = 87.95
b = 56.62β = 113.85
c = 64.07γ = 109.52
Software Package:
Software NamePurpose
XDSdata reduction
XSCALEdata scaling
PHENIXrefinement
PDB_EXTRACTdata extraction
MR-Rosettaphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2017-12-13
    Type: Initial release
  • Version 1.1: 2023-10-04
    Changes: Data collection, Database references, Refinement description