5Y0U

The solution structure of AEBP2 C2H2 zinc fingers

PDB DOI: https://doi.org/10.2210/pdb5Y0U/pdb

Classification: METAL BINDING PROTEIN
Organism(s): Homo sapiens
Expression System: Escherichia coli 'BL21-Gold(DE3)pLysS AG
Mutation(s): No

Deposited: 2017-07-18 Released: 2018-08-01
Deposition Author(s): Sun, A., Shi, Y., Wu, J.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Structural and biochemical insights into human zinc finger protein AEBP2 reveals interactions with RBBP4.

Sun, A., Li, F., Liu, Z., Jiang, Y., Zhang, J., Wu, J., Shi, Y.

(2018) Protein Cell 9: 738-742

PubMed: 29134516 Search on PubMedSearch on PubMed Central
DOI: https://doi.org/10.1007/s13238-017-0483-6
Primary Citation of Related Structures:
5Y0U, 5Y1U

Organizational Affiliation

Hefei National Laboratory for Physical Sciences at Microscale and School of Life Sciences, University of Science and Technology of China, Hefei, 230027, China.

Macromolecule Content

Total Structure Weight: 12.38 kDa
Atom Count: 855
Modelled Residue Count: 109
Deposited Residue Count: 109
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Zinc finger protein AEBP2	A	109	Homo sapiens	Mutation(s): 0 Gene Names: AEBP2
UniProt & NIH Common Fund Data Resources
Find proteins for Q6ZN18 (Homo sapiens) Explore Q6ZN18 Go to UniProtKB: Q6ZN18
PHAROS: Q6ZN18 GTEx: ENSG00000139154
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q6ZN18
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ZN Query on ZN Download Ideal Coordinates CCD File SDF format, chain B [auth A] SDF format, chain C [auth A] SDF format, chain D [auth A] MOL2 format, chain B [auth A] MOL2 format, chain C [auth A] MOL2 format, chain D [auth A]	B [auth A], C [auth A], D [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain B [auth A] Focus chain C [auth A] Focus chain D [auth A]