Download MendeleySeMet structure of the non-core minor pilin PilV from Neisseria meningitidis in the orthorhombic form
Kolappan, S., Craig, L.To be published.
5V23
SeMet crystal structure of the Neisseria meningitidis non-core minor pilin PilV in the orthorhombic form
- PDB DOI: https://doi.org/10.2210/pdb5V23/pdb
- Classification: CELL ADHESION
- Organism(s): Neisseria meningitidis
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2017-03-02 Released: 2018-02-07
- Funding Organization(s): Canadian Institutes of Health Research (CIHR)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.96 Å
- R-Value Free: 0.255
- R-Value Work: 0.185
- R-Value Observed: 0.188
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Type IV pilin protein | 98 | Neisseria meningitidis | Mutation(s): 0 Gene Names: A6L27_01160 |  | |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GOL Query on GOL | B [auth A], C [auth A], D [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.96 Å
- R-Value Free: 0.255
- R-Value Work: 0.185
- R-Value Observed: 0.188
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 21.794 | α = 90 |
| b = 39.343 | β = 90 |
| c = 109.61 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| Aimless | data scaling |
| SOLVE | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2018-02-07 Deposition Author(s): Kolappan, S., Craig, L.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Canadian Institutes of Health Research (CIHR) | Canada | MOP125959 |
Revision History (Full details and data files)
- Version 1.0: 2018-02-07
Type: Initial release - Version 1.1: 2018-02-28
Changes: Structure summary - Version 1.2: 2020-01-08
Changes: Author supporting evidence
