Download MendeleyStructure of the N-terminal domain of lipoprotein-releasing system transmembrane protein LolE from Acinetobacter baumannii
Abendroth, J., Mayclin, S.J., Lorimer, D.D., Edwards, T.E.To be published.
5UDF
Structure of the N-terminal domain of lipoprotein-releasing system transmembrane protein LolE from Acinetobacter baumannii
- PDB DOI: https://doi.org/10.2210/pdb5UDF/pdb
- Classification: PROTEIN TRANSPORT
- Organism(s): Acinetobacter baumannii
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2016-12-26 Released: 2017-01-18
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.35 Å
- R-Value Free: 0.218
- R-Value Work: 0.176
- R-Value Observed: 0.179
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Lipoprotein-releasing system transmembrane protein LolE | 230 | Acinetobacter baumannii | Mutation(s): 0 Gene Names: lolC, lolE, ABUW_0974, LV38_03997 |  | |
UniProt | |||||
Find proteins for A0A0D5YFP2 (Acinetobacter baumannii) Explore A0A0D5YFP2 Go to UniProtKB: A0A0D5YFP2 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A0D5YFP2 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.35 Å
- R-Value Free: 0.218
- R-Value Work: 0.176
- R-Value Observed: 0.179
- Space Group: H 3
- Diffraction Data: https://doi.org/10.18430/M35UDF
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 156.37 | α = 90 |
| b = 156.37 | β = 90 |
| c = 91.16 | γ = 120 |
| Software Name | Purpose |
|---|---|
| XDS | data reduction |
| XSCALE | data scaling |
| PHASER | phasing |
| BUCCANEER | model building |
| Coot | model building |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
Entry History
Deposition Data
- Released Date: 2017-01-18 Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Revision History (Full details and data files)
- Version 1.0: 2017-01-18
Type: Initial release - Version 1.1: 2024-03-06
Changes: Data collection, Database references, Refinement description
