5O6V

Deposited: 2017-06-07 Released: 2018-02-07
Deposition Author(s): Fuzik, T., Plevka, P.
Funding Organization(s): European Research Council, European Molecular Biology Organization, Czech Science Foundation

Experimental Data Snapshot

wwPDB Validation 3D Report Full Report

This is version 1.5 of the entry. See complete history.

Macromolecule Content

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Envelope protein	A, B, C	496	Tick-borne encephalitis virus (strain HYPR)	Mutation(s): 0
UniProt
Find proteins for Q01299 (Tick-borne encephalitis virus (strain Hypr)) Explore Q01299 Go to UniProtKB: Q01299
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q01299
Sequence Annotations Expand
Reference Sequence

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Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Small envelope protein M	D, E, F	75	Tick-borne encephalitis virus (strain HYPR)	Mutation(s): 0
UniProt
Find proteins for Q01299 (Tick-borne encephalitis virus (strain Hypr)) Explore Q01299 Go to UniProtKB: Q01299
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q01299
Sequence Annotations Expand
Reference Sequence

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(by identity cutoff) | 3D Structure

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
Fab 19/1786 - Heavy chain	G [auth H], H [auth I]	212	Mus musculus	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations Expand
Reference Sequence

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Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details	Image
Fab 19/1786 - Light chain	I [auth L], J [auth M]	208	Mus musculus	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
NAG Query on NAG Download Ideal Coordinates CCD File SDF format, chain K [auth A] SDF format, chain L [auth B] SDF format, chain M [auth C] MOL2 format, chain K [auth A] MOL2 format, chain L [auth B] MOL2 format, chain M [auth C]	K [auth A], L [auth B], M [auth C]	2-acetamido-2-deoxy-beta-D-glucopyranose C₈ H₁₅ N O₆ OVRNDRQMDRJTHS-FMDGEEDCSA-N		Interactions Focus chain K [auth A] Focus chain L [auth B] Focus chain M [auth C] Interactions & Density Focus chain K [auth A] Focus chain L [auth B] Focus chain M [auth C]

Experimental Data & Validation

EM Software:

Entry History & Funding Information

Deposition Author(s):

Fuzik, T.

Funding Organization	Location	Grant Number
European Research Council		355855
European Molecular Biology Organization	Germany	IG3041
Czech Science Foundation	Czech Republic	17-02196S

Version 1.0: 2018-02-07
Type: Initial release
Version 1.1: 2018-03-07
Changes: Database references, Structure summary
Version 1.2: 2018-10-17
Changes: Data collection, Refinement description, Structure summary
Version 1.3: 2019-11-06
Changes: Data collection, Derived calculations, Other
Version 1.4: 2019-12-11
Changes: Other
Version 1.5: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Structure summary