Download MendeleyStructure of Lactobacillus acidophilus glyceraldehyde-3-phosphate dehydrogenase at 2.21 angstrom resolution.
Patel, D., Pappachan, A., Singh, D.D.To be published.
5J9G
Structure of Lactobacillus acidophilus glyceraldehyde-3-phosphate dehydrogenase at 2.21 angstrom resolution
- PDB DOI: https://doi.org/10.2210/pdb5J9G/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Lactobacillus acidophilus NCFM
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2016-04-10 Released: 2017-04-19
- Funding Organization(s): Department of Biotechnology
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.21 Å
- R-Value Free: 0.226
- R-Value Work: 0.203
- R-Value Observed: 0.204
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Glyceraldehyde-3-p dehydrogenase | 338 | Lactobacillus acidophilus NCFM | Mutation(s): 0 Gene Names: LBA0698 EC: 1.2.1.12 |  | |
UniProt | |||||
Find proteins for Q5FL51 (Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM)) Explore Q5FL51 Go to UniProtKB: Q5FL51 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5FL51 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.21 Å
- R-Value Free: 0.226
- R-Value Work: 0.203
- R-Value Observed: 0.204
- Space Group: P 41 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 114.99 | α = 90 |
| b = 114.99 | β = 90 |
| c = 113.3 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| iMOSFLM | data reduction |
| Aimless | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2017-04-19 Deposition Author(s): Patel, D., Pappachan, A., Singh, D.D.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Department of Biotechnology | India | -- |
Revision History (Full details and data files)
- Version 1.0: 2017-04-19
Type: Initial release - Version 1.1: 2023-11-08
Changes: Data collection, Database references, Refinement description
