5HK3

Crystal structure of M. tuberculosis MazF-mt3 T52D-F62D mutant in complex with DNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.56 Å
  • R-Value Free: 0.207 
  • R-Value Work: 0.192 
  • R-Value Observed: 0.193 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Crystal structure of M. tuberculosis MazF-mt3 T52D-F62D mutant in complex with DNA

Yen, T.J.Brennan, R.G.

To be published.

Macromolecules

Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Endoribonuclease MazF6
A, B
114Mycobacterium tuberculosis H37RvMutation(s): 2 
Gene Names: mazF6mazF-mt3Rv1991cMTCY39.28
EC: 3.1.27
UniProt
Find proteins for P9WII3 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Explore P9WII3 
Go to UniProtKB:  P9WII3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP9WII3
Sequence Annotations
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  • Reference Sequence

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Entity ID: 2
MoleculeChains LengthOrganismImage
DNA (5'-D(*AP*GP*UP*CP*UP*CP*CP*UP*UP*UP*C)-3')11Mycobacterium tuberculosis
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.56 Å
  • R-Value Free: 0.207 
  • R-Value Work: 0.192 
  • R-Value Observed: 0.193 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 47.311α = 90
b = 64.244β = 90
c = 73.915γ = 90
Software Package:
Software NamePurpose
HKL-2000data scaling
PHENIXrefinement
PDB_EXTRACTdata extraction
HKL-2000data reduction
PHASERphasing

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2017-01-18
    Type: Initial release
  • Version 1.1: 2024-03-06
    Changes: Data collection, Database references, Refinement description