Download MendeleyStructure of the Eleventh Type III Domain from Human Fibronectin
Rusnac, D.-V., Mou, T.C., Sprang, S.R., Briknarova, K.To be published.
5DFT
Structure of the Eleventh Type III Domain from Human Fibronectin
- PDB DOI: https://doi.org/10.2210/pdb5DFT/pdb
- Classification: CELL ADHESION
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2015-08-27 Released: 2016-09-14
- Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS), National Science Foundation (NSF, United States)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.50 Å
- R-Value Free: 0.248
- R-Value Work: 0.193
- R-Value Observed: 0.197
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Fibronectin | 101 | Homo sapiens | Mutation(s): 0 Gene Names: FN1, FN |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P02751 (Homo sapiens) Explore P02751 Go to UniProtKB: P02751 | |||||
PHAROS: P02751 GTEx: ENSG00000115414 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P02751 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CIT Query on CIT | K [auth D] | CITRIC ACID C6 H8 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.50 Å
- R-Value Free: 0.248
- R-Value Work: 0.193
- R-Value Observed: 0.197
- Space Group: C 2 2 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 82.493 | α = 90 |
| b = 107.402 | β = 90 |
| c = 210.337 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| PHENIX | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2016-09-14 Deposition Author(s): Rusnac, D.-V., Mou, T.C., Sprang, S.R., Briknarova, K.
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | P20GM103546 |
| National Science Foundation (NSF, United States) | United States | MCB-0846132 |
Revision History (Full details and data files)
- Version 1.0: 2016-09-14
Type: Initial release - Version 1.1: 2017-09-20
Changes: Author supporting evidence, Derived calculations - Version 1.2: 2019-11-27
Changes: Author supporting evidence - Version 1.3: 2024-03-06
Changes: Data collection, Database references
