Download MendeleyCrystal Structure of Acetoacetyl-CoA Reductase from Burkholderia Pseudomallei 1710b with bound NADP
Dranow, D.M., Conrady, D.G., Lorimer, D.D., Edwards, T.E.To be published.
5VML
Crystal Structure of Acetoacetyl-CoA Reductase from Burkholderia Pseudomallei 1710b with bound NADP
- PDB DOI: https://doi.org/10.2210/pdb5VML/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Burkholderia pseudomallei 1710b
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2017-04-27 Released: 2017-05-24
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.171
- R-Value Work: 0.144
- R-Value Observed: 0.146
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Acetoacetyl-CoA reductase | 269 | Burkholderia pseudomallei 1710b | Mutation(s): 0 Gene Names: phbB-1, BURPS1710b_2329 EC: 1.1.1.36 |  | |
UniProt | |||||
Find proteins for Q3JRS9 (Burkholderia pseudomallei (strain 1710b)) Explore Q3JRS9 Go to UniProtKB: Q3JRS9 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q3JRS9 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAP Query on NAP | B [auth A] | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE C21 H28 N7 O17 P3 XJLXINKUBYWONI-NNYOXOHSSA-N |  | ||
| MPD Query on MPD | C [auth A] | (4S)-2-METHYL-2,4-PENTANEDIOL C6 H14 O2 SVTBMSDMJJWYQN-YFKPBYRVSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.171
- R-Value Work: 0.144
- R-Value Observed: 0.146
- Space Group: P 42 21 2
- Diffraction Data: https://doi.org/10.18430/M35VML
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 66.31 | α = 90 |
| b = 66.31 | β = 90 |
| c = 115.26 | γ = 90 |
| Software Name | Purpose |
|---|---|
| XSCALE | data scaling |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| XDS | data reduction |
| PHENIX | phasing |
Entry History
Deposition Data
- Released Date: 2017-05-24 Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Revision History (Full details and data files)
- Version 1.0: 2017-05-24
Type: Initial release - Version 1.1: 2023-10-04
Changes: Data collection, Database references, Refinement description
