Download MendeleyCrystal Structure of putative plasmid partition protein (BB_S35) from Borrelia burgdorferi B31 bound to AMPPNP
SSGCID, Delker, S.L., Yano, J.K., Lorimer, D., Edwards, T.E.To be published.
5TVK
Crystal Structure of putative plasmid partition protein (BB_S35) from Borrelia burgdorferi B31 bound to AMPPNP
- PDB DOI: https://doi.org/10.2210/pdb5TVK/pdb
- Classification: CELL CYCLE
- Organism(s): Borreliella burgdorferi B31
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2016-11-09 Released: 2016-11-23
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 Å
- R-Value Free: 0.218
- R-Value Work: 0.169
- R-Value Observed: 0.173
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| PF-32 protein | 267 | Borreliella burgdorferi B31 | Mutation(s): 0 Gene Names: BB_S35, PF-32 |  | |
UniProt | |||||
Find proteins for H7C7Q1 (Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)) Explore H7C7Q1 Go to UniProtKB: H7C7Q1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | H7C7Q1 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ANP Query on ANP | C [auth A], F [auth B] | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER C10 H17 N6 O12 P3 PVKSNHVPLWYQGJ-KQYNXXCUSA-N |  | ||
| LI Query on LI | D [auth A], E [auth A] | LITHIUM ION Li HBBGRARXTFLTSG-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 Å
- R-Value Free: 0.218
- R-Value Work: 0.169
- R-Value Observed: 0.173
- Space Group: P 65
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 57.32 | α = 90 |
| b = 57.32 | β = 90 |
| c = 343.57 | γ = 120 |
| Software Name | Purpose |
|---|---|
| XSCALE | data scaling |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| XDS | data reduction |
| MoRDa | phasing |
Entry History
Deposition Data
- Released Date: 2016-11-23 Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Revision History (Full details and data files)
- Version 1.0: 2016-11-23
Type: Initial release - Version 1.1: 2023-10-04
Changes: Data collection, Database references, Refinement description
