Download MendeleyBrugia malayi Trehalose Phosphate Phosphatase in complex with PEG at the active site
Agarwal, A., Misra-Bhattacharya, S., Ravishankar, R.To be published.
5E0O
Brugia malayi Trehalose-6 Phosphate Phosphatase in complex with PEG at the active site.
- PDB DOI: https://doi.org/10.2210/pdb5E0O/pdb
- Classification: HYDROLASE
- Organism(s): Brugia malayi
- Expression System: Escherichia coli BL21
- Mutation(s): No
- Deposited: 2015-09-29 Released: 2015-10-28
- Funding Organization(s): Council of Scientific and Industrial Research
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.00 Å
- R-Value Free: 0.257
- R-Value Work: 0.218
- R-Value Observed: 0.220
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Trehalose-phosphatase | 526 | Brugia malayi | Mutation(s): 0 Gene Names: Bm1_08695 EC: 3.1.3.12 |  | |
UniProt | |||||
Find proteins for A8NS89 (Brugia malayi) Explore A8NS89 Go to UniProtKB: A8NS89 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A8NS89 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PEG Query on PEG | D [auth A] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N |  | ||
| SO4 Query on SO4 | C [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| MG Query on MG | B [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.00 Å
- R-Value Free: 0.257
- R-Value Work: 0.218
- R-Value Observed: 0.220
- Space Group: P 64 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 167.931 | α = 90 |
| b = 167.931 | β = 90 |
| c = 102.956 | γ = 120 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| HKL-2000 | data scaling |
| PDB_EXTRACT | data extraction |
| HKL-2000 | data reduction |
| PHENIX | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2015-10-28 Deposition Author(s): Agarwal, A., Misra-Bhattacharya, S., Ravishankar, R.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Council of Scientific and Industrial Research | India | BSC0104 |
Revision History (Full details and data files)
- Version 1.0: 2015-10-28
Type: Initial release - Version 1.1: 2023-11-08
Changes: Data collection, Database references, Derived calculations, Refinement description
