Download MendeleyN-terminal structure of putative DNA binding transcription factor from Thermoplasmatales archaeon SCGC AB-539-N05
Chang, C., Li, H., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)To be published.
5DUK
N-terminal structure of putative DNA binding transcription factor from Thermoplasmatales archaeon SCGC AB-539-N05
- PDB DOI: https://doi.org/10.2210/pdb5DUK/pdb
- Classification: TRANSCRIPTION
- Organism(s): Thermoplasmatales archaeon SCGC AB-539-N05
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2015-09-18 Released: 2015-10-07
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.35 Å
- R-Value Free: 0.253
- R-Value Work: 0.224
- R-Value Observed: 0.226
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| putative DNA binding protein | 77 | Thermoplasmatales archaeon SCGC AB-539-N05 | Mutation(s): 0 Gene Names: MBGDN05_00160 |  | |
UniProt | |||||
Find proteins for M7T6A0 (Thermoplasmatales archaeon SCGC AB-539-N05) Explore M7T6A0 Go to UniProtKB: M7T6A0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | M7T6A0 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.35 Å
- R-Value Free: 0.253
- R-Value Work: 0.224
- R-Value Observed: 0.226
- Space Group: P 43 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 43.179 | α = 90 |
| b = 43.179 | β = 90 |
| c = 194.54 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SCALEPACK | data scaling |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| HKL-3000 | data reduction |
| HKL-3000 | phasing |
| SBC-Collect | data collection |
Entry History
Deposition Data
- Released Date: 2015-10-07 Deposition Author(s): Chang, C., Li, H., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2015-10-07
Type: Initial release
