Download MendeleyCrystal structure of insect thioredoxin at 1.95 Angstroms
Klinke, S., Tejedor, M.D., Cerutti, M.L., Giacometti, R., Otero, L.H., Goldbaum, F.A., Zavala, J.A., Wolosiuk, R.A., Pagano, E.A.To be published.
5DBQ
Crystal structure of insect thioredoxin at 1.95 Angstroms
- PDB DOI: https://doi.org/10.2210/pdb5DBQ/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Anticarsia gemmatalis
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2015-08-21 Released: 2016-08-24
- Funding Organization(s): ANPCyT
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.95 Å
- R-Value Free: 0.250
- R-Value Work: 0.210
- R-Value Observed: 0.212
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Thioredoxin | 109 | Anticarsia gemmatalis | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for A0A0Y0BMD0 (Anticarsia gemmatalis) Explore A0A0Y0BMD0 Go to UniProtKB: A0A0Y0BMD0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A0Y0BMD0 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.95 Å
- R-Value Free: 0.250
- R-Value Work: 0.210
- R-Value Observed: 0.212
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 107.71 | α = 90 |
| b = 28.98 | β = 128.32 |
| c = 79.86 | γ = 90 |
| Software Name | Purpose |
|---|---|
| BUSTER | refinement |
| PROTEUM PLUS | data collection |
| XDS | data scaling |
| MrBUMP | phasing |
| MOLREP | phasing |
| PHASER | phasing |
| Coot | model building |
| XDS | data reduction |
Entry History & Funding Information
Deposition Data
- Released Date: 2016-08-24 Deposition Author(s): Klinke, S., Tejedor, M.D., Cerutti, M.L., Giacometti, R., Otero, L.H., Goldbaum, F.A., Zavala, J.A., Wolosiuk, R.A., Pagano, E.A.
| Funding Organization | Location | Grant Number |
|---|---|---|
| ANPCyT | Argentina | PICT 2011-2115 |
| ANPCyT | Argentina | PPL2-03 |
Revision History (Full details and data files)
- Version 1.0: 2016-08-24
Type: Initial release - Version 1.1: 2017-09-27
Changes: Data collection, Derived calculations, Refinement description - Version 1.2: 2023-09-27
Changes: Data collection, Database references, Refinement description
