Download MendeleyCRYSTAL STRUCTURE OF Fox-4 cephamycinase complexed with sulfate
Malashkevich, V.N., Toro, R., Lefurgy, S., Almo, S.C.To be published.
5CHU
CRYSTAL STRUCTURE OF Fox-4 cephamycinase complexed with sulfate
- PDB DOI: https://doi.org/10.2210/pdb5CHU/pdb
- Classification: HYDROLASE
- Organism(s): Escherichia coli
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2015-07-10 Released: 2016-08-03
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.10 Å
- R-Value Free: 0.204
- R-Value Work: 0.188
- R-Value Observed: 0.189
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Beta-lactamase | 362 | Escherichia coli | Mutation(s): 0 Gene Names: fox-4 EC: 3.5.2.6 |  | |
UniProt | |||||
Find proteins for Q9L387 (Escherichia coli) Explore Q9L387 Go to UniProtKB: Q9L387 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9L387 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | G [auth A], L [auth B], M [auth B], P [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| ZN Query on ZN | C [auth A] D [auth A] E [auth A] F [auth A] H [auth B] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | ||
| ACT Query on ACT | N [auth B], O [auth B] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.10 Å
- R-Value Free: 0.204
- R-Value Work: 0.188
- R-Value Observed: 0.189
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 53.419 | α = 90 |
| b = 53.922 | β = 89.87 |
| c = 116.167 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SCALA | data scaling |
| PHASER | phasing |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| MOSFLM | data reduction |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2016-08-03 Deposition Author(s): Malashkevich, V.N., Toro, R., Lefurgy, S., Almo, S.C.
Revision History (Full details and data files)
- Version 1.0: 2016-08-03
Type: Initial release - Version 1.1: 2016-08-10
Changes: Derived calculations - Version 1.2: 2023-09-27
Changes: Data collection, Database references, Derived calculations, Refinement description
