5ABW
Neutrophil elastase inhibitors for the treatment of (cardio)pulmonary diseases
- PDB DOI: https://doi.org/10.2210/pdb5ABW/pdb
- Classification: HYDROLASE
- Organism(s): Homo sapiens
- Mutation(s): No 
- Deposited: 2015-08-10 Released: 2015-08-19 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 Å
- R-Value Free: 0.194 
- R-Value Work: 0.158 
- R-Value Observed: 0.160 
This is version 2.0 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
NEUTROPHIL ELASTASE | 218 | Homo sapiens | Mutation(s): 0  EC: 3.4.21.37 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P08246 (Homo sapiens) Explore P08246  Go to UniProtKB:  P08246 | |||||
PHAROS:  P08246 GTEx:  ENSG00000197561  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P08246 | ||||
Sequence AnnotationsExpand | |||||
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Oligosaccharides
Small Molecules
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
WQQ Query on WQQ | C [auth A] | 1-(3-CHLOROPHENYL)-5-(3,5-DIMETHYLISOXAZOL-4-YL)-6-METHYL-N-[4-(METHYLSULFONYL)BENZYL]-2-OXO-1,2-DIHYDROPYRIDINE-3-CARBOXAMIDE C26 H24 Cl N3 O5 S QYWSDDYRNPGJNA-UHFFFAOYSA-N | |||
CL Query on CL | D [auth A], E [auth A], F [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 Å
- R-Value Free: 0.194 
- R-Value Work: 0.158 
- R-Value Observed: 0.160 
- Space Group: P 63
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 73.225 | α = 90 |
b = 73.225 | β = 90 |
c = 70.475 | γ = 120 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
SAINT | data reduction |
SADABS | data scaling |
MOLREP | phasing |
Entry History 
Deposition Data
- Released Date: 2015-08-19  Deposition Author(s): von Nussbaum, F., Li, V.M., Schaefer, M.
Revision History (Full details and data files)
- Version 1.0: 2015-08-19
Type: Initial release - Version 1.1: 2017-03-22
Changes: Database references - Version 1.2: 2018-05-23
Changes: Data collection, Structure summary - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Atomic model, Data collection, Derived calculations, Other, Structure summary