4ZZP
Dictyostelium purpureum cellobiohydrolase Cel7A apo structure
- PDB DOI: https://doi.org/10.2210/pdb4ZZP/pdb
- Classification: HYDROLASE
- Organism(s): Dictyostelium purpureum
- Expression System: Trichoderma reesei QM6a
- Mutation(s): No
- Deposited: 2015-04-13 Released: 2016-04-13
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 Å
- R-Value Free: 0.313
- R-Value Work: 0.235
- R-Value Observed: 0.239
This is version 2.2 of the entry. See complete history.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| CELLULOSE 1,4-BETA-CELLOBIOSIDASE | 439 | Dictyostelium purpureum | Mutation(s): 0 EC: 3.2.1.176 |  | |
UniProt | |||||
Find proteins for F0ZJZ1 (Dictyostelium purpureum) Explore F0ZJZ1 Go to UniProtKB: F0ZJZ1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | F0ZJZ1 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAG Query on NAG | C [auth A], D [auth A], E [auth B] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| PCA Query on PCA | A, B | L-PEPTIDE LINKING | C5 H7 N O3 |  | GLN |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 Å
- R-Value Free: 0.313
- R-Value Work: 0.235
- R-Value Observed: 0.239
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 55.643 | α = 90 |
| b = 85.185 | β = 90 |
| c = 168.503 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| XDS | data reduction |
| SCALA | data scaling |
| REFMAC | phasing |
Entry History
Deposition Data
- Released Date: 2016-04-13 Deposition Author(s): Momeni, M.H., Hobdey, S.E., Knott, B., Beckham, G.T., Stahlberg, J.
Revision History (Full details and data files)
- Version 1.0: 2016-04-13
Type: Initial release - Version 1.1: 2016-06-01
Changes: Database references - Version 2.0: 2020-03-11
Changes: Data collection, Derived calculations, Other, Polymer sequence - Version 2.1: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Structure summary - Version 2.2: 2024-01-10
Changes: Data collection, Database references, Refinement description, Structure summary
