Download MendeleyCrystal structure of the bacteriophage G20C portal protein
Williams, L.S., Turkenburg, J.P., Levdikov, V.M., Minakhin, L., Severinov, K., Antson, A.A.To be published.
4ZJN
Crystal structure of the bacteriophage G20C portal protein
- PDB DOI: https://doi.org/10.2210/pdb4ZJN/pdb
- Classification: TRANSPORT PROTEIN
- Organism(s): Bacteriophage sp.
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2015-04-29 Released: 2015-05-27
- Funding Organization(s): Wellcome Trust
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.98 Å
- R-Value Free: 0.205
- R-Value Work: 0.175
- R-Value Observed: 0.175
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Portal protein | 426 | Bacteriophage sp. | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for A7XXR3 (Thermus virus P74-26) Explore A7XXR3 Go to UniProtKB: A7XXR3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A7XXR3 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MPD Query on MPD | D [auth A], E [auth B], F [auth C] | (4S)-2-METHYL-2,4-PENTANEDIOL C6 H14 O2 SVTBMSDMJJWYQN-YFKPBYRVSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.98 Å
- R-Value Free: 0.205
- R-Value Work: 0.175
- R-Value Observed: 0.175
- Space Group: P 4 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 155.328 | α = 90 |
| b = 155.328 | β = 90 |
| c = 115.445 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| Aimless | data scaling |
| XDS | data reduction |
| SHELX | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2015-05-27 Deposition Author(s): Williams, L.S., Turkenburg, J.P., Levdikov, V.M., Minakhin, L., Severinov, K., Antson, A.A.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Wellcome Trust | United Kingdom | 098230 |
Revision History (Full details and data files)
- Version 1.0: 2015-05-27
Type: Initial release
