Download MendeleyCrystal structure of an Acid stress chaperone HdeB (KPN_03484) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578 at 1.70 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
4XVV
Crystal structure of an Acid stress chaperone HdeB (KPN_03484) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578 at 1.70 A resolution
- PDB DOI: https://doi.org/10.2210/pdb4XVV/pdb
- Classification: CHAPERONE
- Organism(s): Klebsiella pneumoniae subsp. pneumoniae MGH 78578
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2015-01-28 Released: 2015-02-11
- Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.226
- R-Value Work: 0.197
- R-Value Observed: 0.198
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Acid stress chaperone HdeB | 77 | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | Mutation(s): 0 Gene Names: hdeB, KPN_03484 |  | |
UniProt | |||||
Find proteins for A6TE95 (Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)) Explore A6TE95 Go to UniProtKB: A6TE95 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A6TE95 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.226
- R-Value Work: 0.197
- R-Value Observed: 0.198
- Space Group: P 21 21 21
- Diffraction Data: https://doi.org/10.18430/m30c7c
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 36.475 | α = 90 |
| b = 39.443 | β = 90 |
| c = 98.256 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PDB_EXTRACT | data extraction |
| SOLVE | phasing |
| XSCALE | data scaling |
| REFMAC | refinement |
Entry History & Funding Information
Deposition Data
- Released Date: 2015-02-11 Deposition Author(s): Joint Center for Structural Genomics (JCSG)
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | U54 GM094586 |
Revision History (Full details and data files)
- Version 1.0: 2015-02-11
Type: Initial release - Version 1.1: 2017-09-20
Changes: Author supporting evidence, Derived calculations, Refinement description, Source and taxonomy - Version 1.2: 2018-01-24
Changes: Database references - Version 1.3: 2019-12-25
Changes: Author supporting evidence - Version 1.4: 2023-02-01
Changes: Data collection, Database references
