Download MendeleyCrystal Structure of an Acyl-CoA dehydrogenase from Brucella melitensis
Dranow, D.M., Edwards, T.E., Lorimer, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)To be published.
4W9U
Crystal Structure of an Acyl-CoA dehydrogenase from Brucella melitensis
- PDB DOI: https://doi.org/10.2210/pdb4W9U/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Brucella abortus 2308
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2014-08-27 Released: 2014-09-10
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 Å
- R-Value Free: 0.239
- R-Value Work: 0.180
- R-Value Observed: 0.183
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Acyl-CoA dehydrogenase | 395 | Brucella abortus 2308 | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for Q2YPZ4 (Brucella abortus (strain 2308)) Explore Q2YPZ4 Go to UniProtKB: Q2YPZ4 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q2YPZ4 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EDO Query on EDO | E [auth A] F [auth A] G [auth C] H [auth D] I [auth D] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 Å
- R-Value Free: 0.239
- R-Value Work: 0.180
- R-Value Observed: 0.183
- Space Group: P 1 21 1
- Diffraction Data: https://doi.org/10.18430/M34W9U
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 82.02 | α = 90 |
| b = 106.66 | β = 108.12 |
| c = 99.39 | γ = 90 |
| Software Name | Purpose |
|---|---|
| XDS | data reduction |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| XSCALE | data scaling |
| BALBES | phasing |
Entry History
Deposition Data
- Released Date: 2014-09-10 Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Revision History (Full details and data files)
- Version 1.0: 2014-09-10
Type: Initial release - Version 1.1: 2017-11-22
Changes: Derived calculations, Other, Refinement description, Source and taxonomy - Version 1.2: 2023-12-27
Changes: Data collection, Database references, Refinement description
