Download MendeleyCrystal Structure of Human Glycogenin-2 Catalytic Domain
Fairhead, M., Strain-Damerell, C., Krojer, T., Froese, D.S., Kopec, J., Nowak, R., Burgess-Brown, N., von Delft, F., Arrowsmith, C., Edwards, A., Bountra, C., Yue, W.W.To be published.
4UEG
Crystal structure of human glycogenin-2 catalytic domain
- PDB DOI: https://doi.org/10.2210/pdb4UEG/pdb
- Classification: TRANSFERASE
- Organism(s): Homo sapiens
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2014-12-17 Released: 2014-12-24
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.93 Å
- R-Value Free: 0.224
- R-Value Work: 0.187
- R-Value Observed: 0.189
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| GLYCOGENIN-2 | 288 | Homo sapiens | Mutation(s): 2 EC: 2.4.1.186 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O15488 (Homo sapiens) Explore O15488 Go to UniProtKB: O15488 | |||||
PHAROS: O15488 GTEx: ENSG00000056998 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O15488 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MG Query on MG | C [auth A], D [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.93 Å
- R-Value Free: 0.224
- R-Value Work: 0.187
- R-Value Observed: 0.189
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 127.113 | α = 90 |
| b = 80.541 | β = 118.74 |
| c = 73.683 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| SCALEPACK | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2014-12-24 Deposition Author(s): Fairhead, M., Strain-Damerell, C., Krojer, T., Froese, D.S., Kopec, J., Nowak, R., Burgess-Brown, N., von Delft, F., Arrowsmith, C., Edwards, A., Bountra, C., Yue, W.W.
Revision History (Full details and data files)
- Version 1.0: 2014-12-24
Type: Initial release - Version 1.1: 2018-01-24
Changes: Database references - Version 1.2: 2023-12-20
Changes: Data collection, Database references, Derived calculations, Other, Refinement description
