4R9P

An Expansion to the Smad MH2-family: The structure of the N-MH2 expanded domain

PDB DOI: https://doi.org/10.2210/pdb4R9P/pdb

Classification: TRANSCRIPTION
Organism(s): Drosophila melanogaster
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2014-09-06 Released: 2015-04-08
Deposition Author(s): Beich-Frandsen, M., Aragon, E., Llimargas, M., Benach, J., Riera, A., Macias, M.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.59 Å
R-Value Free: 0.198
R-Value Work: 0.176
R-Value Observed: 0.178

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Structure of the N-terminal domain of the protein Expansion: an 'Expansion' to the Smad MH2

Beich-Frandsen, M., Aragon, E., Llimargas, M., Benach, J., Riera, A., Pous, J., Macias, M.J.

(2015) Acta Crystallogr D Biol Crystallogr 71: 844-853

Macromolecule Content

Total Structure Weight: 28 kDa
Atom Count: 1,815
Modelled Residue Count: 210
Deposited Residue Count: 242
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
RE28239p	A	242	Drosophila melanogaster	Mutation(s): 0 Gene Names: CG13188
UniProt
Find proteins for A1Z8R1 (Drosophila melanogaster) Explore A1Z8R1 Go to UniProtKB: A1Z8R1
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A1Z8R1
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.59 Å
R-Value Free: 0.198
R-Value Work: 0.176
R-Value Observed: 0.178
Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 36.84	α = 90
b = 45.67	β = 93.31
c = 54.19	γ = 90

Software Package:

Software Name	Purpose
XDS	data scaling
PHASER	phasing
PHENIX	refinement
XDS	data reduction

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2015-04-08

Deposition Author(s):

Beich-Frandsen, M.

Revision History (Full details and data files)

Version 1.0: 2015-04-08
Type: Initial release
Version 1.1: 2024-02-28
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.