Download MendeleyAcireductone dioxygenase from Bacillus anthracis with cadmium ion in active center
Milaczewska, A.M., Chruszcz, M., Shabalin, I.G., Cooper, D.R., Borowski, T., Minor, W.To be published.
4QGM
Acireductone dioxygenase from Bacillus anthracis with cadmium ion in active center
- PDB DOI: https://doi.org/10.2210/pdb4QGM/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Bacillus anthracis str. 'Ames Ancestor
- Expression System: Escherichia coli BL21
- Mutation(s): No
- Deposited: 2014-05-23 Released: 2014-06-18
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.97 Å
- R-Value Free: 0.234
- R-Value Work: 0.184
- R-Value Observed: 0.186
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Acireductone dioxygenase | 174 | Bacillus anthracis str. 'Ames Ancestor | Mutation(s): 0 Gene Names: BAS3949, BA_4258, GBAA4258, GBAA_4258, mtnD EC: 1.13.11.54 (PDB Primary Data), 1.13.11.53 (PDB Primary Data) |  | |
UniProt | |||||
Find proteins for Q81MI9 (Bacillus anthracis) Explore Q81MI9 Go to UniProtKB: Q81MI9 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q81MI9 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CD Query on CD | B [auth A] | CADMIUM ION Cd WLZRMCYVCSSEQC-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.97 Å
- R-Value Free: 0.234
- R-Value Work: 0.184
- R-Value Observed: 0.186
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 106.215 | α = 90 |
| b = 49.522 | β = 99.95 |
| c = 33.349 | γ = 90 |
| Software Name | Purpose |
|---|---|
| HKL-3000 | phasing |
| REFMAC | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
Entry History
Deposition Data
- Released Date: 2014-06-18 Deposition Author(s): Milaczewska, A.M., Chruszcz, M., Shabalin, I.G., Cooper, D.R., Borowski, T., Anderson, W.F., Minor, W., Center for Structural Genomics of Infectious Diseases (CSGID)
Revision History (Full details and data files)
- Version 1.0: 2014-06-18
Type: Initial release - Version 1.1: 2017-02-08
Changes: Structure summary - Version 1.2: 2017-11-22
Changes: Refinement description - Version 1.3: 2022-04-13
Changes: Database references, Derived calculations, Structure summary - Version 1.4: 2023-09-20
Changes: Data collection, Refinement description
